Gene Mmcs_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_0888 
Symbol 
ID4109729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp980201 
End bp981391 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID638030010 
ProductAcyl-CoA dehydrogenase, type 2-like protein 
Protein accessionYP_638060 
Protein GI108797863 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCACGAA CACCCTGGAC CGCGCCGCTG ACCGCCGACG AGACCGACCG CTGGGACGCC 
GTCGCCGATG AGGTCGGCCA ACTGCTCGCC CGCGACGCTC TGCAGCGCGA CCGCGCCAAC
CAGCAACCCG ACGCCGAGCT GAAATTGCTC AAGGACTCCG GGCTGGCCAA CCTGCTGATC
CCGCGGGAGT TCGGTGGCCA CGGCGGCCAC TGGTCGACCG GTCTGCGCGC GGTGCGGATC
CTGGCGCGCC ACGACGCGTC GATCGCGCAG ATCCTGAGCT ACCACTACTG CAATCAGGCG
AGCATCGTGT TCTTCGGCGA GCGCGCCCGC TGGGAGCGCT GGTTCACGGC ATCCGCGCAG
GGCAGTTGGC TGTGGGGTGA CGCCGTTAAC CCCGTCGACC CCGACCTGGT ACTCAGCCCT
GACGGCGACG GGTATCGGCT CGACGGGCGT AAGCGGTTCG CCACCGGGGC ATCGACCGGT
GACGTCACGC TGGTGATGGC CGCTCATGCC GGACGGGTGC TGGCGCTGGT GGTCGAACGT
GACCGCGACG GTATCGAATT CGCCGGCGAC TGGGACGCTT TGGGCCAGCG CCTGTCGGCC
AGCGGCAGCG TCGACTTCCA CGATGTCGCG GTCGCGCCCG GCGATGTGCT CGGCGAGGTG
GCCGATGAAC CGTACTCGAC GCTCGTCACG CCTGGGGTTC AGCTCGGCTT CGGCAACCTC
TACCTGGGGA TCGCCGAGGG GGCGTTGGCC CGGGCGCGGC AGTTGACGCT CGACCGCCGG
GGCGCGTGGC TGCTGAGTAA TGTCGAGCAC TACTCGCGGG ACCCGTTCGT GCAGAGGGTG
TTCGGTGAGC TGCTGTCCCG GACCGCTGCC GTCGAGGCGC TGGCCGACCG GTGGAACACC
CGCTTCGACG CAGCCATCGC GCGGGGTGCG GACGTCACCG CCGCGGATCG AACCGAGGTG
GAGATCGGGA TCGCCCAGCT CAAGGTGGTG GCCACCGAGA CGGCGCTGGA GGTGGCCCAC
CGGGTCTACG AGGTCACCGG GTCAAGTTCG GCGCGAAGCG AAGTGGGACT CGACCTGTTC
TGGCGCAACA TCCGCACCCA CTCGCTGCAC GACCCCGTCG ACTACAAGAA GCTCGAGGTC
GGTGCCCACT ATCTGACCGG TGACGTGCAG CCGATCACCC TGTACACCTA G
 
Protein sequence
MPRTPWTAPL TADETDRWDA VADEVGQLLA RDALQRDRAN QQPDAELKLL KDSGLANLLI 
PREFGGHGGH WSTGLRAVRI LARHDASIAQ ILSYHYCNQA SIVFFGERAR WERWFTASAQ
GSWLWGDAVN PVDPDLVLSP DGDGYRLDGR KRFATGASTG DVTLVMAAHA GRVLALVVER
DRDGIEFAGD WDALGQRLSA SGSVDFHDVA VAPGDVLGEV ADEPYSTLVT PGVQLGFGNL
YLGIAEGALA RARQLTLDRR GAWLLSNVEH YSRDPFVQRV FGELLSRTAA VEALADRWNT
RFDAAIARGA DVTAADRTEV EIGIAQLKVV ATETALEVAH RVYEVTGSSS ARSEVGLDLF
WRNIRTHSLH DPVDYKKLEV GAHYLTGDVQ PITLYT