| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0348 |
|---|
| Symbol | |
|---|
| ID | 4109194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 385399 |
|---|
| End bp | 386892 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638029473 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_637525 |
|---|
| Protein GI | 108797328 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACA CGGTTCAGCA CTGGTGCAAC AACGACGTCT TCGCGGGCGG CTCGCAGGCC
ACCGCGCCGG TGACAAATCC GGCGACCGGT GAGGTGACCG GTCAGGTCGC GCTGGCCGGC
GTCGAGGATG CCCGCACGGT GATCGAGGCG GCCGCGGCGG CGTTCCCGGC CTGGCGGGAC
ACCTCGCTGG CCAAGCGCAC CTCGGTGCTG TTCAACTTCC GCGAACTGCT CAACGCCCGC
AAGCACGAGT TGGCCGCGAT CATCACCGCC GAGCACGGCA AGGTGCTCTC CGACGCGCTC
GGCGAGGTCA GCCGCGGCCA GGAGGTCGTC GAGTTCGCCT GCGGCATCCC GCATCTGCTC
AAGGGCGGGT TCACCGAGAA CGCCTCGACC AACGTCGACG TGTACTCCAT CCGCCAGGCC
CTCGGGGTGG TCGGCATCAT CAGCCCGTTC AACTTCCCGG CCATGGTGCC GATGTGGTTC
TTCCCCGTCG CGATCGCCAC CGGCAACACC GTCGTGCTCA AGCCGAGCGA GAAGGACCCG
TCGGCGTCGC TGTGGCTGGC CCGCCTGTGG AAGGAAGCCG GACTGCCCGA CGGCGTGTTC
AACGTGCTGC AGGGCGACAA GACCGCGGTC GACGAACTGC TCACCCATCC GAAGGTCAAG
GCGGTGTCGT TCGTCGGGTC CACCCCGATC GCCCAGTACG TCTACGCCAC CGGCACCGCC
GCGGGTAAGC GCGTGCAGGC CCTGGGTGGG GCGAAGAACC ACGCGGTGAT CCTGCCCGAC
GCCGACCTCG ACCTGGCCGC CGACGCCATG GTCAACGCCG GCTTCGGCTC GGCCGGGGAA
CGCTGCATGG CGATCAGCGC CTGTGTGGCC GTCGGGCCGA TCGCCGACGA CCTGGTCGCC
AAGATCGGTG AGCGGGCACG CGCACTTCGC ACCGGTGACG GCACCAAGGA TTCCGACATG
GGCCCGCTGG TGACCAAGGC CCACCGCGAC AAGGTGGCCT CCTACATCGA CGCCGGGGAG
GCCGACGGCG CCAAGGTCGT CGTCGACGGC CGCCAGGTCT CCGCCGACGG TGGCGAGAAC
GGCTTCTGGC TCGGACCCAC CCTGCTCGAC AACGTCACCC CCGAGATGAG CGTCTACACC
GACGAGATCT TCGGCCCGGT CCTGTCGGTC GTGCGCGTCG AGACCTACGA CGAAGCGCTC
GAGCTCATCA ACAGCAATCC CTACGGCAAC GGCACCGCGA TCTTCACCAA CGACGGCGGC
GCGGCCCGGC GCTTCCAGAA CGAGGTCGAG GTCGGCATGG TCGGCATCAA CGTGCCGATC
CCGGTGCCGA TGGCCTACTA CAGCTTCGGC GGCTGGAAGA ACTCGCTGTT CGGCGACAGC
CACGCCCACG GCACCGAAGG CGTGCACTTC TTCACCCGAG GCAAGGCCAT CACCCAACGC
TGGCTCGATC CGTCCCACGG CGGCATCAAC CTCGGCTTCC CGCAGAACAA CTAA
|
|---|
| Protein sequence | MANTVQHWCN NDVFAGGSQA TAPVTNPATG EVTGQVALAG VEDARTVIEA AAAAFPAWRD
TSLAKRTSVL FNFRELLNAR KHELAAIITA EHGKVLSDAL GEVSRGQEVV EFACGIPHLL
KGGFTENAST NVDVYSIRQA LGVVGIISPF NFPAMVPMWF FPVAIATGNT VVLKPSEKDP
SASLWLARLW KEAGLPDGVF NVLQGDKTAV DELLTHPKVK AVSFVGSTPI AQYVYATGTA
AGKRVQALGG AKNHAVILPD ADLDLAADAM VNAGFGSAGE RCMAISACVA VGPIADDLVA
KIGERARALR TGDGTKDSDM GPLVTKAHRD KVASYIDAGE ADGAKVVVDG RQVSADGGEN
GFWLGPTLLD NVTPEMSVYT DEIFGPVLSV VRVETYDEAL ELINSNPYGN GTAIFTNDGG
AARRFQNEVE VGMVGINVPI PVPMAYYSFG GWKNSLFGDS HAHGTEGVHF FTRGKAITQR
WLDPSHGGIN LGFPQNN
|
|---|
| |