Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3603 |
Symbol | |
ID | 4483433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4524610 |
End bp | 4525299 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639724352 |
Product | TrkA domain-containing protein |
Protein accession | YP_867494 |
Protein GI | 117926877 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGAGC GGTTTCTAGT CGCTGGGTTG GGTGCTTTCG GGCGGCAGGC GGCGTTGGCG TTGGCCAACG GCGGCGGCGT GGTTCTAGCG GTTGACATCG ATGACCGCGC GGTGGATGCG GTGAAGGACC ACGTCGCCCG GGCCATCTGC TGCGATGCCA CCGACGAACA TGCCATGGAG GCCGTGGGGG CCTACGACGT GGATGTGGCG GTCATCGCCA TCCGACGTGC CTTTGATATC GCGGTGCTGA CGACCCATTC TTTGCAAATG CGGAGGATTC CAAAGATCCT GGTGCAGGTG GATTCGGAGC GACAAGGCGA TGCCATTTTG GCCGTGGGAG CCACAGAGGT GATCATTCCC CACCGCGACA TCGCCATCCG TACCGCCAAC CGGCTGTTGC ACGGCAACCT GGTGGAGATG CTGCCCTTGG ACAAGAATAT CGCGGTGGTG GAGTGGTCCT GCCCCGGGGA GTTCGCCGGG CGAGACCTGC GTGCCCTGGA TCTGCGGCGC AAATGGGGTA TCAGCGTTCT AGCTGTACAG CGTGCGGCGG CGGACCGGCA GGAGAGCGGA GCAACGCTGG TCAACCCGCC GGCGGACACC GTGTTACACC TGGGAGATAA TTTGGTCTTG ATGGGTGCCC ATGAACATCT CGTCCGAGTA TCACGTCTAG GCACCGCGAA TGGGGCGTAG
|
Protein sequence | MNERFLVAGL GAFGRQAALA LANGGGVVLA VDIDDRAVDA VKDHVARAIC CDATDEHAME AVGAYDVDVA VIAIRRAFDI AVLTTHSLQM RRIPKILVQV DSERQGDAIL AVGATEVIIP HRDIAIRTAN RLLHGNLVEM LPLDKNIAVV EWSCPGEFAG RDLRALDLRR KWGISVLAVQ RAAADRQESG ATLVNPPADT VLHLGDNLVL MGAHEHLVRV SRLGTANGA
|
| |