| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3544 |
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| Symbol | |
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| ID | 4482499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4448143 |
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| End bp | 4448730 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724293 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_867435 |
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| Protein GI | 117926818 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000268156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAAT TGGCCAATCG TGACGAAGCT CAACGCCTAG ACGCCGCTTA TGCCGATGCA
GAACTGCTGC AAAGGGTAGC TGGTGGGGAT GAGCAAGCGG CTCAGCAGCT GGTGCGCGGT
CATGCCCATG CGCTTTATGG GTTGGCGCGA CGGCTCTTGG AGGGGTGGGA GTCTGAGGCC
GATGATGTGG TGCAGGATGC CTTTTTGCGG TTATGGCAGC AGGCCGCCAG TTGGCGGCCT
GAGGCTCGCA TTAACACATG GCTGCATCGC GTGACCTACA ACCTCTGTAT AGACCGCCTT
AGATGCAAAA AAGGGGTGGC ACTGGATAGT ATTGCAGAGC CAGAAGATCC CCGCCAGGAT
CTGCTCCAGC ACCACCACCG TCAAGAGAAG GCTGCGCGTA TTGAGTCGGC CTTGGCGGCA
CTACCCAAGC GTCAATGCGC GGCCATTACC TTGGTGCATC ATCAAGGTTT TAGTCAGCAA
GAGGCGGCGG AGATCATGAA CATAGGGGTC AAAGCGTTGG AGTCACTGCT CAGTCGGGGA
CGCAAGCAGT TACGGGTGAT GCTGGCGGAT TTGGAACGTG GGGTATAG
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| Protein sequence | MLQLANRDEA QRLDAAYADA ELLQRVAGGD EQAAQQLVRG HAHALYGLAR RLLEGWESEA
DDVVQDAFLR LWQQAASWRP EARINTWLHR VTYNLCIDRL RCKKGVALDS IAEPEDPRQD
LLQHHHRQEK AARIESALAA LPKRQCAAIT LVHHQGFSQQ EAAEIMNIGV KALESLLSRG
RKQLRVMLAD LERGV
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