| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3531 |
|---|
| Symbol | |
|---|
| ID | 4480382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4425582 |
|---|
| End bp | 4426010 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639724280 |
|---|
| Product | general secretion pathway protein G |
|---|
| Protein accession | YP_867422 |
|---|
| Protein GI | 117926805 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR01710] general secretion pathway protein G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.524702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGC CACTTCCTCA CACCAAACGC TGGCGTATCA TTATGGTCGA ACTGCTGGTG
GTTCTATCGC TGGGTGGTTT TATCTGGTTT TTCTTCGGCG GGCAATTGAT AGAGCAGCTA
CGTGGGGGTC AGACTGAGGT TGCCCAAAAC CGCATGAAAA TTCTGGAAGA AGCTTTACTC
CAGTATGGCC GAGATGTGGG TGACTACCCC AGCCAAAATG AAGGTCTGGA TGCCTTAATC
GAATCCCCAC GGGGCGCGCC ACAATGGCAG GGTCCCTATA CATCACCCCC TGCACTCTTA
GATCCATGGA ACCGCTCCTT TTATTACGTC TATCCGGGTC ACCACGGTGT GTTTGATCTC
TACTCCTTGG GACGAGACAA TAAAAAAGGT GGCGTATTGG TCAACCGTGA TGTGCAAAAT
TGGCCGTAA
|
|---|
| Protein sequence | MKPPLPHTKR WRIIMVELLV VLSLGGFIWF FFGGQLIEQL RGGQTEVAQN RMKILEEALL
QYGRDVGDYP SQNEGLDALI ESPRGAPQWQ GPYTSPPALL DPWNRSFYYV YPGHHGVFDL
YSLGRDNKKG GVLVNRDVQN WP
|
|---|
| |