| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3487 |
|---|
| Symbol | |
|---|
| ID | 4481959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4357128 |
|---|
| End bp | 4357784 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639724235 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_867378 |
|---|
| Protein GI | 117926761 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAAC GAATCGGTGT GGTGCTCTCG GGCTGTGGTG TTTATGATGG TGCAGAGATC
CATGAAGCGA CCTTGACCCT CTATTTTCTG GATAAAGCGG GTACCAAGGT GGTCTGCATG
GCCCCGGATA AAGATCAATT TCACGTGGTA AACCACCTGA CTGGGGATGA AATGCCCGAG
CGCCGCAATG TTCGGGTGGA GTCAGCCCGT ATTGCGCGGG GTGATGTCAA ACGGCTGGAC
GAGGTTAAGG CGACCGAACT GGACGGGTTG ATTATACCGG GCGGTTTTGG CATGGCTAAA
AATCTCTCTA CCCTCGCCTT TGATGGTGCC AACGCCCAAG TTGATGAAGA TCTGGTTGCG
CTGGTTATGG CCATGCATGG GGCGGGGAAA CCCATTGGGG CCCTCTGTAT TACACCCGCA
GTGCTCTCCA AAATCTTAGC GGAGCGTGGT GTGCGCCTAA CCATTGGTAA TGATGAAGGC
ACTGCTGAGG CTATCCGCAA CATGGGCAAT ACCCATGTGG AGAGTGGTGC TGAGCAGATT
ATCATTGATG AGCAGAACAA TGTGATCTCC AGTGCCGCCT ACATGTGCGC GGCCAGCATT
GCCGAGGCGG GGGTGGGCAT TGAAAAATTG GTGGCCGAGG TGTTAAAGCG CGCTTAA
|
|---|
| Protein sequence | MGKRIGVVLS GCGVYDGAEI HEATLTLYFL DKAGTKVVCM APDKDQFHVV NHLTGDEMPE
RRNVRVESAR IARGDVKRLD EVKATELDGL IIPGGFGMAK NLSTLAFDGA NAQVDEDLVA
LVMAMHGAGK PIGALCITPA VLSKILAERG VRLTIGNDEG TAEAIRNMGN THVESGAEQI
IIDEQNNVIS SAAYMCAASI AEAGVGIEKL VAEVLKRA
|
|---|
| |