| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3479 |
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| Symbol | |
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| ID | 4481951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4343382 |
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| End bp | 4345349 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639724227 |
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| Product | transketolase |
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| Protein accession | YP_867370 |
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| Protein GI | 117926753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0109031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT CGGATCTGGA TCGTCTCTGT ATTAATACCC TTCGCATGTT GTCGGTGGAT
GCCATTGAGG CTGCCAATTC CGGGCACCCG GGTTTGCCAC TGGGGGCAGC GCCTATGGCC
TATGTGTTAT GGTCGCGGAT TATGCGGCAT AACCCCAAAA ATCCCCTTTG GCCCGACCGT
GACCGCTTTA TCCTCTCGGC AGGGCATGGT TCGGCGCTGC TCTACGCGCT GCTGCACACC
AGCGGTTATG ATGTGAGCTT GGATGAGCTG AAAAATTTCC GCCAATATGG CAGCAAGACC
CCCGGTCACC CCGAATATGG TCACACCCCA GGGGTGGAGT GTACCACAGG CCCCTTGGGT
CAGGGGTTCG CCATGGGGGT GGGGATGGCT TTGGCAGAGC GGCATCTGGC GCAGCAGGTC
AACCGCGCGG AGTTTCATCC CATTGTCGAC CACTTTACCT ATGGCATTGT CGGTGATGGC
GACCTAATGG AAGGCATTAC CTATGAAGCG GCGGCTATGG CGGGCAACCT CTGCCTGGGT
AAGTTAATCT ATCTGTATGA TGATAATGGC ATCTCCATCG AGGGCAGTAC GGAGATTGCC
TTTACCGAGG ATGTCACCAC CCGCTTTGAG GCGGCCGAGT GGCAGGTGCT CACGGTTGAG
GATGGTGAGG ATCTGGATGC CATTGAGGCG GCGATTCTTC AGGCTCAGCA AGAAGAAGAG
CGCCCCTCGC TGATCCGGGT TAAGACGGTG ATTGGTCGTG GCAGCCCCAA GCAGGGTACC
GCCGCCACCC ACGGTTCCCC CATTAAGGGG GCGGATATGG TCGCTACCCG TCAGGTTTAT
GCATGGCCCG AGACGCGTTT TTATCTCCCT GACGAGGCCC AAAGCCACTT TGCGCAAATG
GTTAAGCGCG GGGCTGAGGC CGAAGCGGAG TGGAACGCCA CCCGCGAAAT TTATATGAGC
CGTTTTCCCA CCGAGACTGA GCTGTTGTTG GAGCGTCTGG CCGGTGAGCT GACCGATGGC
TGGGATCGCT CTTTGGATGA GCTAACCTTT GCACCATCGG CGGCGACCCG CTCCACTTCG
GGTCAATGTC TGAATGCCAT TGCCCAGGAT CTGCCGGGTC TGATTGGGGG TTCAGCCGAT
CTAGGTCCCT CCAACAACAC CACCCTGAAG CATTTTCCCG AGCGTACCTT GCACTTTGGG
GTGCGGGAGC ACGCCATGGG TGCGGTACTC AACGGATTGG CGTTGCATGG GGGCTTTCAC
CCCTATGGGG GCACCTTTTT GGTCTTTTCC GACTATCTGC GTGGGGCGAT TCGTCTCTCT
GCCCTTATGC ATCTACCGGT GACCTATGTG TTGACCCATG ACAGCATTGG GGTGGGGGAG
GATGGTCCGA CCCACCAGCC GGTGGAGCAT GTGGCCAGTT TGCGTGCCAT CCCTGGGCTC
AATGTATTCC GTCCGTGCGA TGGCGAGGAG ACCCGCGCAG CATGGCACTG GACCCTCTGC
CACAAGGCCC CTGCGGCAAT GATTCTGACC CGTCAGGAGC TGCCCGAGTT GGGCGGTGGT
GAAGGGGTTA TGGAAGGGGT AGCGCGTGGG GGATATATCA AGGTGGATTG CCAAGGCACG
CCCGATCTTA TCCTGTTGGC CAGTGGTAGT GAGGTGAGTT TGGCGGTGGC GGCGGCGGCG
CAGTTGAGCG CTAAAGGGCA CCAGGTCCGG GTGGTCTCCA TGCCCTGTAT GGAGCGCTTT
GATGTCCAGG ATGCCGCCTA TAAAGAGTCG GTCTTGCCGG CGGCGGTGGC AACACGTCTG
GCGGTGGAGG CGGGTTCGAC CATGAGCTGG TATAAATATG TGGGCTTAGA GGGAGAGGTT
ATCGGTTTGG ATAACTTTGG TGCCTCGGGT CCTGGTGATA CCTTAATGGA GGTTTACGGC
TTTACCACGG AAAATGTGGT GGCCCAGGCC CAGGAGCTGC TGGGTTAA
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| Protein sequence | MSTSDLDRLC INTLRMLSVD AIEAANSGHP GLPLGAAPMA YVLWSRIMRH NPKNPLWPDR
DRFILSAGHG SALLYALLHT SGYDVSLDEL KNFRQYGSKT PGHPEYGHTP GVECTTGPLG
QGFAMGVGMA LAERHLAQQV NRAEFHPIVD HFTYGIVGDG DLMEGITYEA AAMAGNLCLG
KLIYLYDDNG ISIEGSTEIA FTEDVTTRFE AAEWQVLTVE DGEDLDAIEA AILQAQQEEE
RPSLIRVKTV IGRGSPKQGT AATHGSPIKG ADMVATRQVY AWPETRFYLP DEAQSHFAQM
VKRGAEAEAE WNATREIYMS RFPTETELLL ERLAGELTDG WDRSLDELTF APSAATRSTS
GQCLNAIAQD LPGLIGGSAD LGPSNNTTLK HFPERTLHFG VREHAMGAVL NGLALHGGFH
PYGGTFLVFS DYLRGAIRLS ALMHLPVTYV LTHDSIGVGE DGPTHQPVEH VASLRAIPGL
NVFRPCDGEE TRAAWHWTLC HKAPAAMILT RQELPELGGG EGVMEGVARG GYIKVDCQGT
PDLILLASGS EVSLAVAAAA QLSAKGHQVR VVSMPCMERF DVQDAAYKES VLPAAVATRL
AVEAGSTMSW YKYVGLEGEV IGLDNFGASG PGDTLMEVYG FTTENVVAQA QELLG
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