Gene Mmc1_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3474 
Symbol 
ID4481946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4336638 
End bp4337054 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID639724222 
Productcytochrome c, class I 
Protein accessionYP_867365 
Protein GI117926748 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0293116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTA CACCAGCCTG GGGGGCAAGG GCATTACTGC TGTTGGCTGT GCTCACCGTG 
GTGTTTGCCA CCAAGCGTGA ATCGGCCATC GCGGCTGGGG AGCACCAGCC CGCTAGCCTA
CGCGCCTGCC GAGTGTGCCA CGATTTAAGC TCCGAGAAAA AAAGCCAAGG CTTTATTGGC
CCCCCCCTGT GGGGGGTTGC CAACCGCTCC ATCGGTTCGG AAAACAGCTT TGCGGGTTAT
TCAGAGACCC TGGTTAGCAT GGGTGCTCAT GGTAAAATCT GGGACCGTCG CACCCTGGAG
CGCTATCTGG CGGACCCCCG CATGTTTGCC CCGGGATGTC GCATGGCCTT TACCGGTATC
GCGGATGAAA AGAGCCGCAT GCAGGCCGTG GATTATCTCT TTTCCATGCA GGATTAA
 
Protein sequence
MSGTPAWGAR ALLLLAVLTV VFATKRESAI AAGEHQPASL RACRVCHDLS SEKKSQGFIG 
PPLWGVANRS IGSENSFAGY SETLVSMGAH GKIWDRRTLE RYLADPRMFA PGCRMAFTGI
ADEKSRMQAV DYLFSMQD