Gene Mmc1_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3386 
Symbol 
ID4484072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4221265 
End bp4221642 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content54% 
IMG OID639724134 
Productcation efflux system protein 
Protein accessionYP_867278 
Protein GI117926661 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC GCCTTATTAC TGTGTGTGCC GCCCTACTTC TGCTCTCTGG GCAAGCCATG 
GCCGATTCTC ATAGCACCAT GGATCACAGT GGCCATAGCA TGGCTCCTGC GGCTATGGAT
CACAGCACCA TGGCACAGGA GCAGCCATCT AACCAAGCCG ATGCCATGGG CCTGATCCAC
CATGTGGATG CCAAACAGGC GCGGGTCAAC TTAACCCACG ACCCCATCCC CGCGCTGGGC
TGGCCCGGCA TGACCATGGA TTTACCGGTG AGCAACAAGG TTGATTTAAG CGCTTTTCAA
GCGGGGGATA AGGTCCACTT TACCGTTAAA CTGGGGCGGG ATAATACCTA CCGCATCATC
CAAATGATGA AACATTAA
 
Protein sequence
MQKRLITVCA ALLLLSGQAM ADSHSTMDHS GHSMAPAAMD HSTMAQEQPS NQADAMGLIH 
HVDAKQARVN LTHDPIPALG WPGMTMDLPV SNKVDLSAFQ AGDKVHFTVK LGRDNTYRII
QMMKH