| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3225 |
|---|
| Symbol | |
|---|
| ID | 4481890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4011616 |
|---|
| End bp | 4012434 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639723974 |
|---|
| Product | flagellin domain-containing protein |
|---|
| Protein accession | YP_867121 |
|---|
| Protein GI | 117926504 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0422433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATCA CCGTGAACAG TGCTATGTTT GTTGCGCCAC AGAGCGGTAG TCAACTTTTT
AAGGTTCAGG AAGAGAGTAA GAGTTCATTT GCCGCGCTCT CCTCCGGTAT CAAGATAAAT
CAGGCCAGTG ACAACCCAGG CTTAATGGGT ATGATCAGTC GTCTGACCAG TGAAGTGCGT
AATATTAATG TGGCCCGCCA GAATGTGAAC CAAGGGGTTT CCCTCTCCCA GGTTGCACAG
ACCGGTGTGA GCATTGTTAG TGACGACGTG CAGCGTCTGC GGGAGCTGGC GGTGCAGGCG
GCCAACGGTA CCTTGAGCGA TGCGGATCGC TCCAATTTGC ATCAGGAGGC CGCGCAGCTC
CAACAGAACA TTGCGGATAC CATTCGCGAT ACCCAATTTA ATGGGCAAAG CTTGTTGGAT
CGCAACAGCA GCATCTCCAT TCAGTCGGGT TCGGGTGCGG GGGATCAGAC GGATTTACAA
CTGCGGGATC TGTCGGGGCT TAACAGCACG GGTACCATTG ATCTGAGCAG TCAGGCTGGG
GCAGAAGCCG CGTTGGCTCA GTTGGATGCC GATTTGCAGG AGCTAAGCGA CTTTAACAGC
AGCTTGGGTT CTTATCAAAA CCGTTTGGAG GCCGCTGCCG ACACCATCAG CCAAGCCGCG
ATTAATACCG AGGCAGCGCG GGCGCAGGTG CGGGATACCG ATATTGCGGC GGAGATGGCC
CGTCAAACCG GTTCAGCGAT TCGTATGCAG AGTGTCATTG CGGTACAGGC CCAGGCGACC
CAGATTTCTG AGCATATTGT GGCGCGTTTG ATGGGGTAG
|
|---|
| Protein sequence | MSITVNSAMF VAPQSGSQLF KVQEESKSSF AALSSGIKIN QASDNPGLMG MISRLTSEVR
NINVARQNVN QGVSLSQVAQ TGVSIVSDDV QRLRELAVQA ANGTLSDADR SNLHQEAAQL
QQNIADTIRD TQFNGQSLLD RNSSISIQSG SGAGDQTDLQ LRDLSGLNST GTIDLSSQAG
AEAALAQLDA DLQELSDFNS SLGSYQNRLE AAADTISQAA INTEAARAQV RDTDIAAEMA
RQTGSAIRMQ SVIAVQAQAT QISEHIVARL MG
|
|---|
| |