Gene Mmc1_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3195 
Symbol 
ID4481628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3979764 
End bp3980009 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content57% 
IMG OID639723944 
Productsodium pump decarboxylases, gamma subunit 
Protein accessionYP_867091 
Protein GI117926474 
COG category[C] Energy production and conversion 
COG ID[COG3630] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit 
TIGRFAM ID[TIGR01195] sodium pump decarboxylases, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.139992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA GTGCGTTGCT CTCAGAAGGC TTTGGTCTAC TGGTGCTAGG TATGGGCACG 
GTCTTTCTCT TTTTGGCCTT GCTTGTATTT ATGGTGGGGC AGATGTCCCA TTTGGCCCGC
TGGATTGAAT CCAAACAACC TCAAGTGGTG CCGATCACAC GGGCCACAGC CCCCACCGGC
ACCCCTGGGG AGCACACGGC GGCGATTGCT GCTGCGGTGC ATCAGTATCG GGCGAAACAT
CGCTGA
 
Protein sequence
MDTSALLSEG FGLLVLGMGT VFLFLALLVF MVGQMSHLAR WIESKQPQVV PITRATAPTG 
TPGEHTAAIA AAVHQYRAKH R