Gene Mmc1_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3172 
Symbol 
ID4483276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3953742 
End bp3954323 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content57% 
IMG OID639723921 
Producthypothetical protein 
Protein accessionYP_867068 
Protein GI117926451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.188105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0572068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCG AGGGGGTTGA TTTTGGTAAG CTGGCCCTGC TTTGTGTAGG GTTGGCGTTG 
TTCTATTTGA TTACCGCCAT CTATATGGCT TCAGGCAGTG ACGAAAAACA GGTCAAGCAG
TGGCCCATGG CCAAAGCCTA TGGCCCCATT ACCACCACGC AAGAGAATCA GGTGGTGGCC
CTCAAGGCCC ATATTGCCCA GCGCGAAGGT AGCTGGAGTT ATCTGGAGGT GGAGCTGCTG
GCCTCGCCCA CCGGGCCGCT CATTACCGGT TTTAGTGGCG AGATGCACTT TGAGACCGGT
TATGACGATG AAGGGCGTTG GGAGGATCGG CAGGAGTGGG TGGAGCAGCG TTTGGTGATC
CCTCAGCCCG GCAGCTACTA CCTGCGATTT AAAGGGGGTG GCGGGGTGGT GGATAACGCG
ACGGCCCCCC TTGATCTGAC ACAATTGGAT TTAGAGATTC GCACGCTGCG TGGGGGCGAC
CGGGGATTTA ATATAGGGGT GGTGATCCTG CTGTTGTTGG GGGTGGGCTT TAACGGGTTT
GCCAATGTTC GCGCCAAACA GCTACAGGAG CAGAACCCAT GA
 
Protein sequence
MQAEGVDFGK LALLCVGLAL FYLITAIYMA SGSDEKQVKQ WPMAKAYGPI TTTQENQVVA 
LKAHIAQREG SWSYLEVELL ASPTGPLITG FSGEMHFETG YDDEGRWEDR QEWVEQRLVI
PQPGSYYLRF KGGGGVVDNA TAPLDLTQLD LEIRTLRGGD RGFNIGVVIL LLLGVGFNGF
ANVRAKQLQE QNP