Gene Mmc1_3121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3121 
Symbol 
ID4483512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3892288 
End bp3893532 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content63% 
IMG OID639723869 
Producthypothetical protein 
Protein accessionYP_867017 
Protein GI117926400 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGGT TACGAGATCG CTTGCGCCAG CTTAAAGGGG AGGCTCCGCT GCCGCCGCCA 
GCGGAGCTAG AGCCGCTGCC AGCGGAGCTA GAGCCGCTGG CGGAGCGGGA TGCCGCTTTG
GCGGGACGGT TAAGGCGTTT GCGCCCCATC GCGGCCCAAA CCGAAGGGGC AGGTACACCG
TTGGCGGATG AGGCCGCGCT TGCTGCTTTT TTGCAGGGGG AGGTGGTGGC TCCAGGGCTT
ATTTTGGTGC GTTGGTGTGC CCCTTTGCAG CAGCATCATG GCCGTTACCC ATTAGAGCGG
CTTATGGAGC CGGTGGCGCA GATTGTGGGG GGAGGGCTGC ACGATCCGAC GCGGTGTGCC
TGGATTGATA CCGAGACCAC CGGTTTGGCC GGGGGCACGG GCACCACGGT GTTTCAGATC
GGGCTGTTGA GGTTGTGGCA AGGGGCACTG CATGGGCGGC AGTGGTTGTT GAGTGGTTAT
GGGGGCGAGG CCGCCATGTT GCGCCAGTTT CAGCAGGCGC TGGCGGGGGT GACGCAGCTG
GTGAGCTTTA ATGGCAAATC CTTTGATGTG CCTCTCTTGG CGACTCGCTT TCGGTTGCAG
GGCATGGCGG ATCCTTTGAG TGGTTTGGCC CATTTGGATC TACTGCATCC CTTTCGGCGT
CTGTTTGCGG GTCAGTTGCC GGACTGTCGT TTGCAGCGGG GGGAGCAGCA TCTATTGGGA
TTGCAGCGGC AGGACGATCT GCCGGGTGCG GAAGCACCGC TGGCGTGGCA GGCGTGGTTG
CGGGGCAAGC GGGGGCATGC TTTGGCGGGG GTGCTTAGGC ATAATCAGGA TGATTTATTG
AGTTTGACGT TGCTGCCGGT GGTGTTGGGG GAGTGTTTTC GCAGTGCGGC CCATGGGGCT
TCACCGTTGG GGGTGGCGCG GGCGTGGATT GAGGCTGGGG ATGAGGGGGT GGCGCGGCAG
GTGTTGGAGA TGCACATGTC GCGGCTGGAT GGGGATGGGT TACAGCAATT GGGTTGGTTG
TATCGTCGGG CGGGTTTGTG GTCGCGGGCG GTGATTGTGT GGCGCATGGC GGCGGCAAAG
GGGCATGCGG CGGCGATGGA GGCATTGGCC AAGTATCATG AGCATCAGGA TCATGATTTG
GCGCAGGCAT GGATCTGGGC GCAGCGCTTA CAGCAGCGGT TGGGGCGCAC GGGTGAGGTG
AGCAAGCGGA TTAACCGTCT GCGCAAAAAG CGCGGTGAGG AGTAA
 
Protein sequence
MAGLRDRLRQ LKGEAPLPPP AELEPLPAEL EPLAERDAAL AGRLRRLRPI AAQTEGAGTP 
LADEAALAAF LQGEVVAPGL ILVRWCAPLQ QHHGRYPLER LMEPVAQIVG GGLHDPTRCA
WIDTETTGLA GGTGTTVFQI GLLRLWQGAL HGRQWLLSGY GGEAAMLRQF QQALAGVTQL
VSFNGKSFDV PLLATRFRLQ GMADPLSGLA HLDLLHPFRR LFAGQLPDCR LQRGEQHLLG
LQRQDDLPGA EAPLAWQAWL RGKRGHALAG VLRHNQDDLL SLTLLPVVLG ECFRSAAHGA
SPLGVARAWI EAGDEGVARQ VLEMHMSRLD GDGLQQLGWL YRRAGLWSRA VIVWRMAAAK
GHAAAMEALA KYHEHQDHDL AQAWIWAQRL QQRLGRTGEV SKRINRLRKK RGEE