Gene Mmc1_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3085 
Symbol 
ID4483167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3855019 
End bp3855873 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content55% 
IMG OID639723833 
Producthypothetical protein 
Protein accessionYP_866982 
Protein GI117926365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.628812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCG CCAATATGGC CTGTAGCGAA GGGTGTCAAA GCTCGTTTAA TCAGGGTCCG 
CTATGGGATA TGCATATTGA AGATAGCCCC ATTTTAGCCA CCGCCATCCA CCAAGGTCAC
GGTTTGTCGC AGCAAGCCCA GCATAACAGC GCGCTCACCA ATGCCAGTCG CCTACGGGAA
GAGGACCCCT TTACCGGTAC TTGGGCCGAG ATCGCCCCCA GCCGGATTGT GGTCAACCGC
TCCCGTTTTG ATCTGGATCT CAACCGCGAT CGCCTGCGGG CGGTCTATCG GCAGCCGGAA
CACGCCTGGG GGCTGGATCT CTGGCACGAG CCGCCAACGC GGGCGCAAGT GCTGGCTAAT
ATGCATCTTT ACAACGCCTT CTACAGCACA TTAGAGTCGT TATTGGGCTT GATGGAGCAG
CGCTGGGGCT ATTTTGTGGT GTTGGATATC CATAGCTACA ACCACCGTCG TGGGGGGATG
CAGGCACCGG TGGATGATCC CCTGCATAAT CCCGAGATTA ATATTGGCAC GGGTACCCTG
TCGAACCGGG CGATGTGGGA GCCGCTGCTT GCTGAGTTTA TGCAGGATCT GCGGCAGTTT
GATTTCAATG GGCGCATGTT GGATGTACGA GAAAACCAGA AATTCCAGGG GGGTGAAATG
GCCCGCTGGA TCCATAGTCG TTTTCCGTTT GCGGCTTGTG TTATCTCCAT TGAGGTCAAG
AAATTTTTTA TGGATGAGTG GACGGGCTTA AAAGATGAAG CTTTGTTCCA ACAGATTGGG
CAGGCTTTAT CCGCAACACT ACCCAGTCTC TTCCGCCATT TGGCCTCGAT GCAGGAACAG
CGTCCCATGG AGTAG
 
Protein sequence
MERANMACSE GCQSSFNQGP LWDMHIEDSP ILATAIHQGH GLSQQAQHNS ALTNASRLRE 
EDPFTGTWAE IAPSRIVVNR SRFDLDLNRD RLRAVYRQPE HAWGLDLWHE PPTRAQVLAN
MHLYNAFYST LESLLGLMEQ RWGYFVVLDI HSYNHRRGGM QAPVDDPLHN PEINIGTGTL
SNRAMWEPLL AEFMQDLRQF DFNGRMLDVR ENQKFQGGEM ARWIHSRFPF AACVISIEVK
KFFMDEWTGL KDEALFQQIG QALSATLPSL FRHLASMQEQ RPME