| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3069 |
|---|
| Symbol | |
|---|
| ID | 4483529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3835300 |
|---|
| End bp | 3835629 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639723817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866966 |
|---|
| Protein GI | 117926349 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000401391 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTC ATACTTCATT GAATGACAAC GAACTGGTTA TCTCTTTGGT TGGTAGCTTT
AGCCATGCCA TATTCAAGGA ATTTAAGAAC GCTTATCTCC CCCTTACACC TGGCCCAAGC
TTTCGTTATT GTATTGATTT GAGCCAGGTA AAATCTTTGG ATAGCTCGGT ACTCGGCATG
TTTCTTATGT TGCGCGCGCA TGCTGGTGAA GCAGAGGCAG ACATTACCCT GCGTAACCCC
ACAAACTTGG TTTTACGCAT GCTGCTGGCT GCTCGTTTCG ACACCATGTT CAAAATCGTC
ACGAACCAGA CGTATCAACC CTCCGCGTAA
|
|---|
| Protein sequence | MPIHTSLNDN ELVISLVGSF SHAIFKEFKN AYLPLTPGPS FRYCIDLSQV KSLDSSVLGM
FLMLRAHAGE AEADITLRNP TNLVLRMLLA ARFDTMFKIV TNQTYQPSA
|
|---|
| |