| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3063 |
|---|
| Symbol | |
|---|
| ID | 4483523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3829707 |
|---|
| End bp | 3830858 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639723811 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_866960 |
|---|
| Protein GI | 117926343 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0588987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000817205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGAGCATCT ATCTGGATCA CAACGCCACC ACGCCGACCC GCCCCGAAGT AGTGGAGGCG
ATGTTGCCCT ACTTCAGCGA CAAGGCTGGT AACCCCTCAT CCGTACACAG TGCGGGGCGG
GCCGCCCGCG AGGGGTTGGA TCGAGCACGG CGCCAAGTGG CGCACCTGCT GGGGGTACAC
TTTAGCCAAG TGCTGTTTAC CAGTGGCGGT ACCGAGGCGA ACAATCTGGC CCTTTTTGGC
ATGGCGGCGC AGTTTGGTTT TGCGGGCCAT ATGGTGACCA CCACGGTGGA ACACCCCGCA
GTGGGGCGGG TGGTGGATGC CCTAGAGGCG CGGGGTATGC GGGTTACCCG CTTGCAGCCA
GACCAGCAGG GGCGAATTGG CACTGAAGCG TTGCAGGCCG CATTGCAGGA GGAGACCCGC
TTGGTCTCCA TCATGGCGGC CAATAATGAG ACCGGTGTGC TGTTGCCGGT GGTGGAGATG
GCGGCGCTGT GTCGGGCACG AGGGGTGCTG TTGCATAGCG ACGCGGTGCA GTGGGTGGGT
AAAATGCCCC TGGATTTGGC GGCAACCCCC ATCTCTTTAG TGAGCCTCTC CGCGCACAAG
TTTGGTGGCC CCAAGGGGGT TGGTGCGCTG GTGGTGGATA GCGCCATTGC CCCTCATGCG
CAACTTCTCG GTGGTGGGCA GGAGCGGGGA CGCCGCTCCG GCACCGAAAA CCTGACCGGC
ATTGTGGGGT TGGGGCGGGC GGCGGAACTG GCGATGGCGG AGATGACCGA GCAAGCCCAG
CGCTGGCGTA CATTGCGCCA GGATATGGAG CAGCAGTTGG TCACGGCGCT ACCGGAGCTG
GTGATCTATG GGGCGCAGGC CCCGCGTCTT CCCAATACCA CAATGCTGGG TTTGCCCGGT
ATGGATGGTG AGACCCTGGT GATGCAGTTG GATCTGGCAG GGGTGGCGGT GAGCAGCGGC
AGTGCGTGCA GCTCGGGCCG CACCGAGCCC TCCCATGTGC TCAAGGCGAT GGGGGTGGAT
ACAGAGACCG CCCGGGGGGC GATACGGGTC TCTCTGGGGG CGGAGAGCCA GCAAAGTGAT
ATAAACCAGC TTGTTCAAGC ATTGATCAGC AGCGTTAAGC GGCTGAAAGA TATGGCGGGC
ATGCGGGTAT AA
|
|---|
| Protein sequence | MSIYLDHNAT TPTRPEVVEA MLPYFSDKAG NPSSVHSAGR AAREGLDRAR RQVAHLLGVH
FSQVLFTSGG TEANNLALFG MAAQFGFAGH MVTTTVEHPA VGRVVDALEA RGMRVTRLQP
DQQGRIGTEA LQAALQEETR LVSIMAANNE TGVLLPVVEM AALCRARGVL LHSDAVQWVG
KMPLDLAATP ISLVSLSAHK FGGPKGVGAL VVDSAIAPHA QLLGGGQERG RRSGTENLTG
IVGLGRAAEL AMAEMTEQAQ RWRTLRQDME QQLVTALPEL VIYGAQAPRL PNTTMLGLPG
MDGETLVMQL DLAGVAVSSG SACSSGRTEP SHVLKAMGVD TETARGAIRV SLGAESQQSD
INQLVQALIS SVKRLKDMAG MRV
|
|---|
| |