Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3059 |
Symbol | |
ID | 4483519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3826817 |
End bp | 3827440 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639723807 |
Product | co-chaperone Hsc20 |
Protein accession | YP_866956 |
Protein GI | 117926339 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | [TIGR00714] Fe-S protein assembly co-chaperone HscB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000668017 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCACTGC ATGCCTGTTG GTCCTGCAAG GGGCCGGTTG AAGCCTCGGC TTTTTGTCCC ACCTGTGGGG CCATTCAGCC ACCGCAGCGC GATCAAAGCC TGTTTGAGTT TTTAGGGCTG CCACCCTCGT ATGGGGTGGA TCCGCAGGCG TTAGAGGCCG CTTGTCTGCG GCTTCAGCAG CAGTTTCACC CCGATAAATT CGCCACCCAG GCCGATACCG CCCGTCGTTA TGCCATGGAG TATGCTACCC GTTTGAACGA GGCTAAGCAG ATTTTAAGCG CTCCCTTGCA GCGGGCCATC TATCTGTTAG AGCAGCTTGG GGGAACAGCC AGTCACGCCA GCGGTGGGGG GCAAGACCCC ATGTTTTTGA TGGAGGTGAT GGAGCTGCGG GAACGGTTGG AAGAGCTGGA TGCCGAGAGC GAAACGGTTT GGGATAAGCT GGAAGCGCTC AAGCATGAGG TGACGGCACT GGCGGAGGAG GAGATTGCCG CCCTGAGCAG CGGTTTTGCC AAGCAGGACG GGGACCCAGA GTGGTGGGTG GTATTGGCCC GGCATATTGA CCGGCTGCGT TATCACACCA AGTTTTTGGA AGAGGTGGAC CGCTTTGAGG AGCGGCTGTT TTAG
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Protein sequence | MSLHACWSCK GPVEASAFCP TCGAIQPPQR DQSLFEFLGL PPSYGVDPQA LEAACLRLQQ QFHPDKFATQ ADTARRYAME YATRLNEAKQ ILSAPLQRAI YLLEQLGGTA SHASGGGQDP MFLMEVMELR ERLEELDAES ETVWDKLEAL KHEVTALAEE EIAALSSGFA KQDGDPEWWV VLARHIDRLR YHTKFLEEVD RFEERLF
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