| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3037 |
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| Symbol | |
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| ID | 4483100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3799520 |
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| End bp | 3800302 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639723784 |
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| Product | FliA/WhiG family RNA polymerase sigma factor |
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| Protein accession | YP_866934 |
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| Protein GI | 117926317 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCA TGAACATGCA TAAACCGGAT GCTAGTCAGG CGCTCTCCAC AGCCGAAGCG
TGGAAAAGCC TGTCGCGGGA GGAGATCATC CTCAAATACG CGCCGCTGGT GCGTTATGTG
GCGGGTCGCA TCTCCATGAA ACTGCCCCAG TCGGTGGATC TGGATGACCT CTATCAGGTG
GGGGTGATGG GGCTGATTGA TGCGGTCTCC AAGTTTGATC CCGACCGTGG CATTAAATTT
CAAACCTATG CGGAGTTCCG CATTCGTGGG GCGATTTTGG ATGAGTTGCG GGCCATTGAT
TGGGTGCCTC GACAGCTGCG CCAAAATGCC AGCCAAATGC AGGAAGCCTA CAACCAGTTG
GAGGCCAAAT TTGGCCGCCC TGCTGAGGAT GTTGAGGTTG CGGAACATCT GGGCATTAGC
CTGAATGAGT ACCACGAGCA GATTGATCAG GTGCGCGGTA TCTCCATCGT CTCGTTTGAG
GATATTCGTC CCAATAACGA TGATGAAGAG TGGGATGTGC TAGAAGTGTT GGCCGACCCC
TCGGTGCAAG ATCCGGTAGA GGCCATCGGT TTGATGGAGT TGCGCCATGC CATGGCCGAT
GCCATTGAGA CCCTGCCAGA AAAAGAGCGC TTGGTGGTGA CCCTCTACTA TTTTGAAGAG
CTGACCATGA GTGAGATTGG CGAGGTGCTG GGTTTGACCG AATCCCGCAT ATCGCAGTTG
CACAGCAAAG CGGCGTTGCG CATGCGAGCA CGGATCAAAC GTTTTTTAAA TCGCGCCAAT
TAG
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| Protein sequence | MSIMNMHKPD ASQALSTAEA WKSLSREEII LKYAPLVRYV AGRISMKLPQ SVDLDDLYQV
GVMGLIDAVS KFDPDRGIKF QTYAEFRIRG AILDELRAID WVPRQLRQNA SQMQEAYNQL
EAKFGRPAED VEVAEHLGIS LNEYHEQIDQ VRGISIVSFE DIRPNNDDEE WDVLEVLADP
SVQDPVEAIG LMELRHAMAD AIETLPEKER LVVTLYYFEE LTMSEIGEVL GLTESRISQL
HSKAALRMRA RIKRFLNRAN
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