Gene Mmc1_3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3026 
Symbol 
ID4483537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3786183 
End bp3786836 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID639723773 
Productresponse regulator receiver protein 
Protein accessionYP_866923 
Protein GI117926306 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTA ATACTAGAAT TTTGGTGATG GATGATAACC CTGAGGTGTT GGAAGCCTAC 
CGTGCCATTT TTTCGGCGCA GGCGACGCAG CCGGGTTTTT TGGAACAGTT TATCGACGAA
TCCGCCAGCC AGCCCCCGCT GAGTGAAGTA AGTAGGTTAG TCTTTGAATT GGTTGCGGTC
AGTCAAGGGC AGGATGGGGT GGCAGAGGTT GAACGGGCCA TGCAACAGCA GCGCCCCTTT
GCGGTTGCTT TTGTGGATAT ACGCATGCCG CCGGGCATGG ATGGGCTGGA GGTTGCCCGG
CGCATTCGGG CGTTGGATGC GCATATCTAT ATTAACATTG TTTCGGCCTA CAGTGATCAC
TCTGTGGATG AGATCCATGA TCAATTGCAG CATGACGTGC AATTTATTAA AAAGCCGGTC
TCCCGTGGGG AACTCTACCA GATGGCGCGG GATGGTTGCG AACGTTGGAA CCATGAACAG
GCGCTGGAGG CGACGCTCCA AAAGTTAAAG GATGAGAAAC AGCAGTTGGA AGCCTCTATG
CACCGTTTAG AACAGGAGCG CCAAAATGTG GTGCGGACTG AAAAGACCGT GGTGGTAGAT
TTTGGTCATA GTGGGGAAGA GTTTGCGAGT TGGGTGGATA TGTTGGATAA GTAG
 
Protein sequence
MTFNTRILVM DDNPEVLEAY RAIFSAQATQ PGFLEQFIDE SASQPPLSEV SRLVFELVAV 
SQGQDGVAEV ERAMQQQRPF AVAFVDIRMP PGMDGLEVAR RIRALDAHIY INIVSAYSDH
SVDEIHDQLQ HDVQFIKKPV SRGELYQMAR DGCERWNHEQ ALEATLQKLK DEKQQLEASM
HRLEQERQNV VRTEKTVVVD FGHSGEEFAS WVDMLDK