| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3019 |
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| Symbol | |
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| ID | 4483530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3777198 |
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| End bp | 3778331 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639723766 |
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| Product | carbamoyl-phosphate synthase small subunit |
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| Protein accession | YP_866916 |
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| Protein GI | 117926299 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAT CCAATCAAGG CCGCGCGGTT TTGGTTCTAG AAGACGGCAC CCGTTTTGAT
GGGCGCTCCC TTGGTGCCCA AACTGAACAG GTAGGGGAGG TCTGTTTTAA CACCTCCATG
ACCGGGTATC AGGAGATTAT GAGCGATCCC TCCTATGCGG GACAGATCGT CACCATGACC
TATACCCAAA TTGGTAATGT GGGCATCAAC CCAGAGGATA TGGAGTCCCG ACGCCCCTGG
ATTCGCGGCT TTATTGTCAA GGAATCCGCC CGCCGCTTCA GTAGCTGGCG GGCTCAGGAG
AGTCTGTCGG TCTTTTTAAC CCGCCATAAT ATTCCCGCGA TTGAAGGCAT TGATACCCGC
GCCTTGGTTT CGCACCTGCG GGATAAAGGG GCCATGCGCG GGGTGCTCTC TACCCTGGAT
TTTAATACCG AAAACTTGAT TGCCAAAGCC AAGAGCTTTC CCGGATTGGC GGGGATGGAT
CTTACCGGGG AGGTCAGTTG CCAAACACCC TACCCTTGGC AACAGGGGCT GTGGGACTTG
GAACAGGGCT ACCGGCAGAT CGAAAGCGGG AGCAACCGCA AGCGGGTAAC GGTGATGGAC
TTTGGGGTCA AGCACAACAT CCTGCGCGGT TTGGTGCAGG CGGGTTGTGA CCTTACCGTG
GTGCCCACCG ATACCCCAGC CGAAAAAATC CTGGCGGGCA ACCCCGACGG TATTTTCCTC
TCCAATGGCC CCGGCGACCC TGATGCTGTC AAACACGGCG TGCGTACCAT CCGCGCCTTG
TTAGAGACCA AAATCCCCAT CTTTGGTATC TGTCTGGGCC ACCAAATGCT CTGCTTGGCC
CTGGGTGCGC AGACCTTAAA GATGAAATTT GGTCATCGTG GTGGTAACCA TCCGGTGCAA
AACCTCTCCA CCGGTGTGGT GGAAGTCACC AGTCAGAACC ATGGTTTTGT GGTTTCAGAT
AGCGCACTGC CCGACACGCT GGAGGTAACC CATCGCTCCC TGTTTGATGG CAGTGTGGAA
GGGGTGCGCA TGAAGGATAA GCCGGTCTTC TCGGTGCAGT ATCACCCCGA GGCCAGCCCC
GGCCCCCACG ATGCCCACTA CCTGTTCAAA CAGTTCGCCG ATCTGATGCG CTAA
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| Protein sequence | MQQSNQGRAV LVLEDGTRFD GRSLGAQTEQ VGEVCFNTSM TGYQEIMSDP SYAGQIVTMT
YTQIGNVGIN PEDMESRRPW IRGFIVKESA RRFSSWRAQE SLSVFLTRHN IPAIEGIDTR
ALVSHLRDKG AMRGVLSTLD FNTENLIAKA KSFPGLAGMD LTGEVSCQTP YPWQQGLWDL
EQGYRQIESG SNRKRVTVMD FGVKHNILRG LVQAGCDLTV VPTDTPAEKI LAGNPDGIFL
SNGPGDPDAV KHGVRTIRAL LETKIPIFGI CLGHQMLCLA LGAQTLKMKF GHRGGNHPVQ
NLSTGVVEVT SQNHGFVVSD SALPDTLEVT HRSLFDGSVE GVRMKDKPVF SVQYHPEASP
GPHDAHYLFK QFADLMR
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