| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3000 |
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| Symbol | |
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| ID | 4483231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3751824 |
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| End bp | 3754730 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639723747 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_866897 |
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| Protein GI | 117926280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTA ACCACAAGAT CTTGCTGTTG ACCATAGCCA TTTTAGCCCT GCTGCTCAGC
GGTAGCACGG CGCTAAATGT GGCAAGCTTT CGCAGTACCT ATACCGATGC TCTCCTCAGA
GGCTCGTTTG GCATAGGCCA CGGCATTAAT GATATTCTTA ACGAGATGCT CTCGCTTGGC
TTGCCGTTGA ACTCGTTGGA CGGCATGGAT ACAAAGCTAA GCAATATTGT CAAGCAAACC
CCACACATTA CCTATGCTGC TATTACGGAT TTGCAAGGCA TGGTGCTGTT TCACAGTGAT
GCACAGCTTA TTGGACGTCA CTTTAAAGAC GAAGCCGCGA TCAAAAGTAC CAATACCCGC
GAACCCATTT GGCAAATTTA TAACCGTTTT GATGGCAAGC GTTATTATGA TGTCGCGTTA
CCCATTTTTG ATCAAACCAA ACAACATATT GGCGTTATTC GTCTCGGTTT TAACAGTAAA
GAGGTCGATG ACCGGGTTTG GCATGAGATC ACCCTTATCG TGATCAATAT GTTCATCACC
TTCGGCCTGA TTGCGCTGTT GCTTAACTTT GTGCTGGTGC GGCTTATTAT TAAGCCTGTT
GAGATTCTTT CTCAGCAAGC CCGTGCCATT AGCGAAGGTC ACTTTGAGAC GGGTCCCCCC
ACGCAACGCA GCGATGAGGT TGGCCAGCTT TCCACCGCCC TTGACCGGAT GTCTGCCACA
CTCCATCAAC AATTTCAAGA TTTAACGCAA TATCAGGCTG AGTTAGAGCT GAAAGTAACC
CGCCGCACCC ATGAACTTGC AGCGGCCAAT CATCTGTTAC TTGAACGCAA TGATGATTTA
GAACAAGCCA TCACCACGCA GCGCCGACTG AATGATCAAC TGCATCAAAA TAAAGAAGCG
CTGCGGGAGA GTAAAACCCT GCTGGTTAGC ATTCTACAGT CGCTTTCAGT AGGCGTGTTT
GGCTTGGATT TAACCGGTAA AATTCAATTT ATAAATCCGG CCGCAGCCAA TATGCTTGGT
GGTGTTATTG AGAGCATGTT AGGGCAATCG GGCCTCTCGC TGTGGTATCA TGATGGCACA
GGTAAAAACC CCAATCCCAT CGGCGTTACC CTTACCAACC ACCAGCCACA ACAAGGCGAG
GGGCGGTTTG TGCATATGCG TGGGCATACC TTGCAAGTAG GCTATACTGT CATGCCCATC
TTAGAGCAAG GTCAGGTTAC CGGTGTTGTG GTAACCTTTA ATGATATCAC CGCCAATCGT
CGGACTGAGC GCTTAACCCG CACGATTATT CAAGGCACCT CGAAGGTTAC GGGGGAGGCT
TTTCAGCGTG AACTGGTGCG TAATATCTCA GAATCTTTGG AGATGCGCTT TGTTTTTGTG
GGTCGTTTTC ATGAGGATCC CATGCCACGC ATCGAAACCA CTTCGGTGTG GGCGAATGGC
CGCCAGGGCG CCCCTTTTAA CTACCTATTA GCGGACACTC CTTGTGCGGA AGTGATCGGC
AAAGAGACCA GCGTGTATGC GGAGCATGTG CAAACGCATT TTCCCAACGA CCCCCTGCTT
GCCGAACTGA AGGTGGAGAG TTACATGGGC ACACCACTGT TTCGCTCCGA TGGCAAGCCC
TTGGGGATTT TGGTTGTTAT GGACGTCCAG CCCCTAACGG ATATTGAATT AGCACGCTCT
ATTTTAGGTA TTTTTTCAGG GCGAGCCGCC ATGGAACTAG AGCGTGAGGA GACTGAACTG
GCGCTACGTG TCGCCAAAGA GCGTGCTGAA GCAGCCAGTC AAGCCAAGAG CGAATTTTTG
GCGATGATGA GCCATGAAAT CCGTACCCCG ATGAATGCCA TTTTGGGCAT AACCGAGTTG
CTACAAGAGC AACCTTCCAA AAAGGAACAG CTTGAATTTC TCACTGTGCA AGCCAAGGCT
GGACAAGCAC TCTTAACCTT GATCAACGAC ATTCTGGAAC TTTCGCGGTT AGAAGCGGGC
CGTGAACAGC TACAAACGGC TCCCTTTGAT CTCTACGAAT TGCTGCGTTC TGTGAGCACG
CTGTTGGAGC CGAGCGCCAA GCATAAGGGT TTGTCCGTGC ATTTGGAAAT TGCTGAGGGC
CTTTCACCAA ACTGGATTGG TGACGAACGG CGGCTACGTC AAGTATTGAT TAACTTGGTT
GGGAACGGCA TTAAGTTTAC CAATCGAGGC TCGATCTGGA TCTCTGCCCA ACCGATGGCC
AATGGTCTTG AAATTAGGGT AAAAGATAGT GGTGCGGGCA TTAATCCCCG TCATCATGAT
AAAATTTTTG AAAGATTCCA TCAGGTTGAT TCTACTGCGA CACGTAAACA TGGTGGTACG
GGCTTAGGGC TGGCGATCAC CAAAAAGCTT ATGGATCTTA TGGGGGGAGA GATCCGCATG
GAAAGTCAAC CTGACCAGGG AAGCTGCTTT ACGCTGGCCT TGCCCCTTAG TGAGGCGCCT
TGCGCTCTCC CTGCGGCGGA GGAGGCCGCC TTGCCACCCC TTGATGTGAC AGCACCGTTG
CGTGCCCTTA AGATCCTGCT GGTGGAGGAC TCAGCAGATA ATGCCTTACT CATTCGCTCC
TTCCTTAAAA GCACACCCTA CCATTTAGAG ATTGTAGAGG ATGGGCAGCA AGCCCTAGAT
CGGCTGCAAG ATTCGAATTT TGATCTGGTT TTAATGGATA TGCAGATGCC CGTTATGGAT
GGTTATACGG CTACCAGCCA GATCCGTCTG CGTGAAGCGT TAGATGAGCT TCCGCCGTCC
ATCATCATTG CCCTCACCGC TCACGCTTTG AAGGGGGACC GGGAAAAGTG TTTGAAGGCA
GGCTGCGATG ATTTTTTAAC CAAGCCCATA CGTAAAAAGC AGTTGCTGGC CTTTTTGGCC
CACTACGCTG TCTCCCCTAC CCTGTAG
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| Protein sequence | MRLNHKILLL TIAILALLLS GSTALNVASF RSTYTDALLR GSFGIGHGIN DILNEMLSLG
LPLNSLDGMD TKLSNIVKQT PHITYAAITD LQGMVLFHSD AQLIGRHFKD EAAIKSTNTR
EPIWQIYNRF DGKRYYDVAL PIFDQTKQHI GVIRLGFNSK EVDDRVWHEI TLIVINMFIT
FGLIALLLNF VLVRLIIKPV EILSQQARAI SEGHFETGPP TQRSDEVGQL STALDRMSAT
LHQQFQDLTQ YQAELELKVT RRTHELAAAN HLLLERNDDL EQAITTQRRL NDQLHQNKEA
LRESKTLLVS ILQSLSVGVF GLDLTGKIQF INPAAANMLG GVIESMLGQS GLSLWYHDGT
GKNPNPIGVT LTNHQPQQGE GRFVHMRGHT LQVGYTVMPI LEQGQVTGVV VTFNDITANR
RTERLTRTII QGTSKVTGEA FQRELVRNIS ESLEMRFVFV GRFHEDPMPR IETTSVWANG
RQGAPFNYLL ADTPCAEVIG KETSVYAEHV QTHFPNDPLL AELKVESYMG TPLFRSDGKP
LGILVVMDVQ PLTDIELARS ILGIFSGRAA MELEREETEL ALRVAKERAE AASQAKSEFL
AMMSHEIRTP MNAILGITEL LQEQPSKKEQ LEFLTVQAKA GQALLTLIND ILELSRLEAG
REQLQTAPFD LYELLRSVST LLEPSAKHKG LSVHLEIAEG LSPNWIGDER RLRQVLINLV
GNGIKFTNRG SIWISAQPMA NGLEIRVKDS GAGINPRHHD KIFERFHQVD STATRKHGGT
GLGLAITKKL MDLMGGEIRM ESQPDQGSCF TLALPLSEAP CALPAAEEAA LPPLDVTAPL
RALKILLVED SADNALLIRS FLKSTPYHLE IVEDGQQALD RLQDSNFDLV LMDMQMPVMD
GYTATSQIRL REALDELPPS IIIALTAHAL KGDREKCLKA GCDDFLTKPI RKKQLLAFLA
HYAVSPTL
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