| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2962 |
|---|
| Symbol | |
|---|
| ID | 4483480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3675113 |
|---|
| End bp | 3677302 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639723709 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_866859 |
|---|
| Protein GI | 117926242 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTT TGGCCCGTTA CCGTAATCTC CCGCTGTTTT GGCAACTGTT ACTCCCCATG
TTGCTGGTGG TAACACTATG GTTTGCCCAC GCCCTCTACA CCTTGCACGG AATGGGACAA
GGCCAACACC GCCTCGTCAA TCTTTATAAC GACAAAGTAC AAAGACTCCT GGAAATGGAA
CGGTTGCAGG TGGAGATCTC ACGCATCCAT CTGCTGCTGC TTAAACATTT GACCAGTGAA
TCTGGTCAGC AGATGGCGGT TACCAAACAA GAGCTTGATC AACACACCCA AGCGTTATAC
AAACTTCTTC AAGAGGTCTC CCATGAGCGC ACCAGTCATG CTGCATCCTT AGTGAGCAAT
CAGGTTGATG AGATTTATCA ACACTATATT ACAGTCTTGG GTAAAGTGCT CACCTTGAGC
GGTGATTTTG AAAAGGAACG AGCCCTTGCC TTGCTTGAGT CTGAGACCGG ACCTGCGCTG
GAGGCCATCC ATGCCATCTT TTTAGATTTG ACCCTTACCG AAGAAAACCA TATGCACCAA
GGGTTTAAAG AAGCTCTTAC GTTACAAAAC CGCATCTATG TCACCACGCT CTTCACGGGC
ATTTTCATTG CGCTCATATC TTGGTTGGTC ATTTGGCTGG TTTCACGACA GACCTCCATG
CGCCTACAGC AGTTGGTGCA GGAGGCCACA GCCTTAGGGC AGGGGCAACT AAACACCCGT
TTAACCATCG AAACCGAGGA TGAGATCGGC AAACTGGCGC ACAGCCTCAA CACCATGGCC
TGCCAATTAG AAGCGGCCAT GACCGAGGAG CACGTGGCCT CCGTGGCGCT ACAGCAGGCC
AACCAAAAAC TTCAATCGGC CCAAGACCGG CTGGAAGAGC GGGTCAAAGC CCGCACCAAA
CGGCTGGCCC TGAGCGAGCA ACAGTTACTG GCAGAAATAA CCATTCGCTC CGCACTCAAT
ACCTTGTTGG AACGCACCTT AGCCACCAAT ACCATCCAGG AGTTGATGGA AGCATGCCTA
GAAAGCCTAC TCTCGCAACC CTTTCTGGGG CTGGCTCAAC AAGGAGGCTT TTTTCTGCTT
GAAGCGGAGA GCGGCAGACT AAAACTCCAG TGCGGGGTGG ATTTTCCCAT GGATGTTTGC
CACCAGTGCC AAGGCACAGC CAACGCCCCG TGTCATCTTT CCTTAGCCGA TGGACAGGTG
CGTTTTCATG CCACCACCAC GTATGATGGC GAGCTGATCG CCCTCTACGT CACCCCTTTG
CAGATTGAGG GTGGGCTGTC GGGGGTGATG ATGTTGCGGG GCGACACCTT ACAAGGGGAA
CGCCTAGAGA CCACCCTCTT TTTACAGTCA TGCGCCCGCA TTATCCGCAT GGCTCTTAAA
CGGCTCCATC TGCAAAGCGT CATGTTACAA CAAGAGAAAA TGGTCTCCTT GGGAGAGATG
GTGGCCGGTG TCGCCCACGA GGTTAACACC CCGGTGGGCA TTGGCGTTAC CGCCGCCTCA
GAACTATGCA GTACCACCCA ACAATTTAGG CGGCTGCTCA ACAGCGAGGG CATTAGCGAG
GATGAGCTGG AGAGCTATCT CCATAGTGTG GAAAGTTGTA GTCAACTGAT TCATGACAGC
ATGCAGCGGG CGGCAACGCT GGTGCGCAGT TTTAAAATGG TCTCGGTAGA TCAGTCCAGC
GAGCAGCAAC GCCGCTTTAA TCTCTACCAA CATCTTGAGG CCATTACCAC CAGCTTGCGG
CATCAGATCC GGGGGGCTCA GGTGGAGATT GTAATCTCCT GCCCGAGGGA TTTGGAGGTC
AACAGCTACC CTGGCGCCTA TGCCCAGATT TTTACCAATT TAATTCAGAA CTCCATCGTT
CACGGTTTTG CTGGCGACAT GCCCACCGTG GGGGGCATCC TCTCCATTGA AGTAGGCCCC
CATGGCGATC AACTGCAAAT CCTCTATCGG GACAATGGTA GCGGCATTGA TCCGGCGGTG
CGTTCAAAAA TTTTTCAACC CTTTTTCACC ACCAAACGCC ACCGTGGGGG CAGTGGTTTG
GGCATGCATG TAGTGTTTAA CTTGATCACA GGCCTGCTTA AAGGCACCAT TAGTTGCGAG
GCCTCCCCAA CTGGAGCGCA CTTTCGCATC CTCCTCCCCT GGGCGTGTGA GCCCCACCTA
ACAGCGACTG AAGCCCGCCC TCATGTTTGA
|
|---|
| Protein sequence | MKGLARYRNL PLFWQLLLPM LLVVTLWFAH ALYTLHGMGQ GQHRLVNLYN DKVQRLLEME
RLQVEISRIH LLLLKHLTSE SGQQMAVTKQ ELDQHTQALY KLLQEVSHER TSHAASLVSN
QVDEIYQHYI TVLGKVLTLS GDFEKERALA LLESETGPAL EAIHAIFLDL TLTEENHMHQ
GFKEALTLQN RIYVTTLFTG IFIALISWLV IWLVSRQTSM RLQQLVQEAT ALGQGQLNTR
LTIETEDEIG KLAHSLNTMA CQLEAAMTEE HVASVALQQA NQKLQSAQDR LEERVKARTK
RLALSEQQLL AEITIRSALN TLLERTLATN TIQELMEACL ESLLSQPFLG LAQQGGFFLL
EAESGRLKLQ CGVDFPMDVC HQCQGTANAP CHLSLADGQV RFHATTTYDG ELIALYVTPL
QIEGGLSGVM MLRGDTLQGE RLETTLFLQS CARIIRMALK RLHLQSVMLQ QEKMVSLGEM
VAGVAHEVNT PVGIGVTAAS ELCSTTQQFR RLLNSEGISE DELESYLHSV ESCSQLIHDS
MQRAATLVRS FKMVSVDQSS EQQRRFNLYQ HLEAITTSLR HQIRGAQVEI VISCPRDLEV
NSYPGAYAQI FTNLIQNSIV HGFAGDMPTV GGILSIEVGP HGDQLQILYR DNGSGIDPAV
RSKIFQPFFT TKRHRGGSGL GMHVVFNLIT GLLKGTISCE ASPTGAHFRI LLPWACEPHL
TATEARPHV
|
|---|
| |