Gene Mmc1_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2957 
Symbol 
ID4482031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3671284 
End bp3671586 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content49% 
IMG OID639723704 
Productanti-sigma-factor antagonist 
Protein accessionYP_866854 
Protein GI117926237 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAAAA CCTATGAAAA AGACCAACAT CTCGTGGTCG TTTTACCCGC GCGGTTTGAT 
TTTAAAATGG CCGACTATTT CCGCGAGATT TACCATAACC ATCCACCCCG CTCCTACCAT
ATTGATTTTA GTGCGGTACA CAGCATGGAC AGTGCCGCCC TAGGCATGTT GCTCCTGCTG
CGGGAACATT GCGGTGGCGA GCAAGCCCGT ATCACCCTAA AAAACTGTCA CGGCCAGTTG
GCACAGCTAC TAAGAATTGC GCGTTTTGAA CAAATATTCC ACACCGAACC CGCCCTAAGT
TAA
 
Protein sequence
MIKTYEKDQH LVVVLPARFD FKMADYFREI YHNHPPRSYH IDFSAVHSMD SAALGMLLLL 
REHCGGEQAR ITLKNCHGQL AQLLRIARFE QIFHTEPALS