Gene Mmc1_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2910 
Symbol 
ID4480806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3603277 
End bp3603552 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content50% 
IMG OID639723653 
Producthistone family protein DNA-binding protein 
Protein accessionYP_866807 
Protein GI117926190 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.351014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.404851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAT CTGAACTCAT TCTCACTATT GCCGCGCAAA AAGGCTTAAC CAAGCAAGCC 
GCAGCTATGG TCGTCGACAT GGTTTTCAAT GAAATTGGTA AGGCAATGGC CAAAGGGGAA
AGAGTTGAGC TTCGAGGCTT TGGCGTATTT GAGCCAAGAG CCAGGAAGCC GCGTGCTGCG
CGCAATCCCA AAACTGGTGA AAAAGTAGCT GTTGAGTCCA AAACAGCCGT GCACTTCAAG
CCAGGGCTGG ATATGCGCAA GCGCGTTGAC TACTGA
 
Protein sequence
MTKSELILTI AAQKGLTKQA AAMVVDMVFN EIGKAMAKGE RVELRGFGVF EPRARKPRAA 
RNPKTGEKVA VESKTAVHFK PGLDMRKRVD Y