Gene Mmc1_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2854 
Symbol 
ID4484105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3558736 
End bp3559122 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content50% 
IMG OID639723599 
ProductXRE family transcriptional regulator 
Protein accessionYP_866753 
Protein GI117926136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0770075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.3412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGAA ACCCACAGTT CGGAATGTTC ATTAGAAGCA TGCGTGAGGA GAAGAAAAAG 
CGAGACCCCG CTTACTCCTT ACGCAAGTTT GCAGAAGCCG CTGGAATCAG CGCCACCTTT
ATGAGCAAGG TGGAGAATGG TGAATTTGAT CCGCCTGCAC CGGATAAAAT CAAAAAGATG
GCGGAGCTTC TGGAGGTTAA TTCTGATGAG CTCCTGGCAA TGGCCGGGAA GGTAGATCCT
GACCTGTCGG GTATTATTCG TGATCAGCCC AGAGCGATGG CAGACTTTTT AAGGACTGCA
CGAGATCTGA ATCTTGGCCG AAAAGAGATA GAGGCGTTAA CAGATAAGCT TCGTGCAGAG
CGAGGCCTGG ATCCAAGCGA GGAGTAG
 
Protein sequence
MPGNPQFGMF IRSMREEKKK RDPAYSLRKF AEAAGISATF MSKVENGEFD PPAPDKIKKM 
AELLEVNSDE LLAMAGKVDP DLSGIIRDQP RAMADFLRTA RDLNLGRKEI EALTDKLRAE
RGLDPSEE