Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2782 |
Symbol | |
ID | 4484153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3495627 |
End bp | 3496652 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723527 |
Product | integrase catalytic subunit |
Protein accession | YP_866681 |
Protein GI | 117926064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.682547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCA CACTAACAGA ACTCATCCAC TACATCACGG GGTTATTCAA GTCTCGTGCA GACCTGAAAC TGGAAATCCT CGCCCTGCGC CACCAGATTA ATGTCTTACA ACGCCAACGC CCCAAGCGCC CTACCCTACG CCATATGGAC AGGATCTTTT GGGTTTGGCT ATCTCAGATC TGGCCTAGGT GGAAACACGC GTTCGTGATT ATAAAACCAG CCACCGTCAT CAAATGGCAC AAGCAAGGCT TCAAGCTCTA TTGGAAACGG AAGTCGCGAC CAATACGCCC TGGCCGTCCT CGCGTCCCGC AGGAAGTGCG GGACCTAATT CGGCAAATGT CGCGGGAAAA TCCACTCTGG GGAGCACCAC GCATACATGG TGAGTTACTG AAATTGGGCT ACGATATAGG AGAGACATCA GTCTCAAAGT ACATGCTCAA ACCTAACAAG CCCCCTTCAC AGACCTGGAG GACCTTCCTT GATAACCACG TAAATCAGAT CGTGGCCATG GACTTCTTCA CCATACCGAC TATCTTTTTC AAGGTGCTGC ACGTCCTCAT TCTGATCGAC CACGATCGCC GCCGGATTAT CCATTTCAAT GTTACGATCA ATCCAACGTC AGCTTGGGTG GTTCAACAAA TCCGCGAAGC GTTTCCCTGG GATTCAGCCC CGCGTTTCCT GCTGCATGAT CGCGATCCAC TCTTCATGGC CAGTCAGCAC TCTCTCAGAG CCATAGGGAT CGAAACGCTG ACCACAGCCC CAGGATCGCC TTGGCAAAAT GCCATCGCAG AACGGATGAT CGGTAGTTGT CGCAGAGAGT ACTTTGACCA CATCATCGTG CTCAACGAAG AACACCTGCG ACAGCGGCTT GGGGAGTATG TGGATTATTA CCACCAGCGG ACCCATCTGG GTTTGGCCAA AGATTCCCCG ATACACCGTG CAGTCCAGCC AAAAGAGTCT GGCAACATCA TTGCGCTCCC AGTTCTCGGT GGTCTACACC ACCGGTACGA GCGCGTTGCT GCCTGA
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Protein sequence | MLGTLTELIH YITGLFKSRA DLKLEILALR HQINVLQRQR PKRPTLRHMD RIFWVWLSQI WPRWKHAFVI IKPATVIKWH KQGFKLYWKR KSRPIRPGRP RVPQEVRDLI RQMSRENPLW GAPRIHGELL KLGYDIGETS VSKYMLKPNK PPSQTWRTFL DNHVNQIVAM DFFTIPTIFF KVLHVLILID HDRRRIIHFN VTINPTSAWV VQQIREAFPW DSAPRFLLHD RDPLFMASQH SLRAIGIETL TTAPGSPWQN AIAERMIGSC RREYFDHIIV LNEEHLRQRL GEYVDYYHQR THLGLAKDSP IHRAVQPKES GNIIALPVLG GLHHRYERVA A
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