| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2542 |
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| Symbol | |
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| ID | 4483857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3234137 |
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| End bp | 3235144 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639723290 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_866448 |
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| Protein GI | 117925831 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00553261 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0729346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTGGC GCGCGTGTCT GTTTGTGGTA ACACTCATGT TCTGTTGGCA GGGGGTGGTT
TTTAGCGCCT TTGCCGCCGA GCAAAAGCTC TATTTAGCCC ATCTTAACCC GAACCAGAGT
GATAATCCAA GCGGGGCCAT GGCGCTGGCC TTTGAGAGAG CCTTGGCCAA ATTGAGCAAG
GGTGGTTTGG CGGTTGAGAC CTTTCCCGAA GGACAGCTTG GCAAAGCGAA GCAGCTTTTG
GATCTTGTGC AACAAGGTGT CATTCAGTCG GCCATTGTCT CCCTGGATGG ATTGGCGGAC
CGTTATCCCC TGATAGGCAT TCTAAATTAT CCCTTTCGGT TTCAAAATTT GGAAGAAACC
TATAGTGTTT TTGATGGCCC GTTTGGTAAA GCCCTGGGGG ATGACATCCT ACAAAAAACG
GGTCTACAGG TGTTAGGCTA TGGGGATACC GGCGGCTTGT TTGTGTTGAC CAATAGTCGC
CGCCCCATCC GCGCGCCAGG GGATATGGCC GGGTTGCGTA TGCGAACGAT GAACTTAGAG
AGCCATATGG CGTTTATGCG CAGCTTGGGG GCCGACCCCG TAGCGGTGGC TTGGGGAGAG
TTATTGTCTC TATTAAAAAA TGGTAGCTTG GATGGTCAAA TGAACCCCGC CACTATTATT
CGCGTGGGTA AATTGGAGCG TGCGCAGAGA TATTTAACCG TTACCAACCA CCTCTATACC
CCTTATGTAT GGGTCGTCAA CCACCCTTTT ATGCAGAGCT TGCATGCAGC CCAGGCGGAC
GCGGTGAATA AAGCGGCGCA GATGGGCGTA ACCGCTAGCC GCGCTTTAGC CATGAAAGAT
GATTCTTTGA CTGAACTGGC TGAAAAAATG CAAGTTTATT ATCCAACCAG CGAACAGTTG
CAAGCTTTTC GTGATCGGGC GCAACCCGCT ATGGAGCAAT TTCTTGAAAA ACAGTATGGC
GAGCAGGGGG CAAAATTGCT GCAACTGTTT CGTCAGGAGA GCCCCTGA
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| Protein sequence | MFWRACLFVV TLMFCWQGVV FSAFAAEQKL YLAHLNPNQS DNPSGAMALA FERALAKLSK
GGLAVETFPE GQLGKAKQLL DLVQQGVIQS AIVSLDGLAD RYPLIGILNY PFRFQNLEET
YSVFDGPFGK ALGDDILQKT GLQVLGYGDT GGLFVLTNSR RPIRAPGDMA GLRMRTMNLE
SHMAFMRSLG ADPVAVAWGE LLSLLKNGSL DGQMNPATII RVGKLERAQR YLTVTNHLYT
PYVWVVNHPF MQSLHAAQAD AVNKAAQMGV TASRALAMKD DSLTELAEKM QVYYPTSEQL
QAFRDRAQPA MEQFLEKQYG EQGAKLLQLF RQESP
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