Gene Mmc1_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2521 
Symbol 
ID4482496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3208890 
End bp3210341 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content60% 
IMG OID639723269 
Producthypothetical protein 
Protein accessionYP_866427 
Protein GI117925810 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.243145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGG TGGGTTGGTG TTTTGATAAC AGCTATGGGC GTCTGCCTGC CCATTTTTAT 
GCACGCTTGG CCCCGGTGCC GGTGGCGCAG CCGCGCTTGG TTTTATGCAA CGACGCGCTG
GCCCAGCAGA TGGGTTTGGA TTTTTCGCAG GTGGATGCGC ATACCCTAGC GCAACAGCTA
TCGGGTAACC AGCTGCCCAC CGGTGCCGAA CCGTTGGCGC AGGCCTATGC GGGGCATCAA
TTTGGTCATT TTACCATGCT GGGGGATGGC CGGGCGATTG TGCTGGGGGA GCATTTGACC
CCCAGCGGGC AACGCTTGGA TGTGCAATTG AAGGGCTCAG GGCGCACCCC TTTTTCCCGC
AATGGCGATG GCCGGGCGGC GCTGGGGCCG ATGTTGCGGG AGTATATCAT CAGCGAAGCG
ATGCATGGAT TGGGTATTGC CACCACCCGC AGTTTGGCGG TGGTCGCTAC CGGTGAAGTG
GTGATGCGGG AAGAGCCCTT GGCGGGGGCC ATTCTGACCC GAGTGGCGGC CAGCCACGTG
CGGGTGGGCA GCTTTCAATA TCTGGCCATG CGTGAGGATG AGGCGGGTTT GGCGCAACTG
GCGGCGTATA CCTTGGCGCG TCACTATCCA GAGCGGCAGG GGGGGGATAA CCCTGCCCTG
GAGCTGCTTA AAGGGGTACT GCAACGGCAG TTAAGTCTGG TGGTGGCATG GATGCGGGTC
GGCTTTATTC ATGGGGTTAT GAACACCGAT AATACCACCC TATCCGGCGA GACCATCGAC
TATGGCCCCT GTGCATTTAT GGATCATTAC CATAAAGATA CGGTGTTTAG CTCCATTGAT
CACGCCGGGC GCTACCGCTA CGGCAATCAG CCCCGTATGA TACGCTGGAA TTTGGCCCGT
CTGGCCGAGG CGCTGTTGCC TCTGCTGCAC CCCAAGCCCA ATAAGGCGAT TGCCCTGGCC
GAGGAGGTGG TGTTCGCCTT TGATGATCGC TATACCGCCA GTTGGCGGGA GATGATGGCC
CACAAACTGG GGCTGTTTGA GTTGCAGGAT GGGGATGACG CGCTCATGGA GCAGCTGCTA
ACCTGGATGC AGCAAAGCCA GGCCGACTAT ACCCAGACCT TTCGCCAGTT GAGCACGCCA
GCGGGGTCAC CGCCATGGCT GGCCAGCTTG GAGCCTTGGT GGCAACAGTG GCAGGCCCGC
TTGGCCCGTC AGGCCCAGCC ATTAGAGAGG GTCTATGCGC GGATGCAGCA GGTTAATCCG
GCCATTATAC CGCGTAATCA CCGGGTGGAG GCCGCTTTGC AGGCAGCCAC CGAGGCGGGG
GATCTGGCTC CAGTGCGGCA ACTGGTGGCG GCCCTGCAAG ATCCTTATCA CGACGGGGTG
GCACAGCAAG CTTATGTCAC CCCACCCGCA CCGGCGCAGG TGGCCCACTA TCAAACCTTT
TGCGGTACCT GA
 
Protein sequence
MGEVGWCFDN SYGRLPAHFY ARLAPVPVAQ PRLVLCNDAL AQQMGLDFSQ VDAHTLAQQL 
SGNQLPTGAE PLAQAYAGHQ FGHFTMLGDG RAIVLGEHLT PSGQRLDVQL KGSGRTPFSR
NGDGRAALGP MLREYIISEA MHGLGIATTR SLAVVATGEV VMREEPLAGA ILTRVAASHV
RVGSFQYLAM REDEAGLAQL AAYTLARHYP ERQGGDNPAL ELLKGVLQRQ LSLVVAWMRV
GFIHGVMNTD NTTLSGETID YGPCAFMDHY HKDTVFSSID HAGRYRYGNQ PRMIRWNLAR
LAEALLPLLH PKPNKAIALA EEVVFAFDDR YTASWREMMA HKLGLFELQD GDDALMEQLL
TWMQQSQADY TQTFRQLSTP AGSPPWLASL EPWWQQWQAR LARQAQPLER VYARMQQVNP
AIIPRNHRVE AALQAATEAG DLAPVRQLVA ALQDPYHDGV AQQAYVTPPA PAQVAHYQTF
CGT