| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2493 |
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| Symbol | |
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| ID | 4484163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3179726 |
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| End bp | 3181180 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639723241 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_866399 |
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| Protein GI | 117925782 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00408967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.431982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC GTCAGATATT GGGTCCCTTT AGTCGGGTGG AGGGGGATCT TGAGGTGCAG
ATTGAGCGCC ACCACAACCG GGTGGCCGAT GCCTGGGTGG TCTCGCCGCT GTATCGGGGG
TTTGAGCGTA TGCTGGTGGG TAAAGAGCCC CAGGATGCCT TGGTTTATGT ACCGCGCATT
TGTGGCATTT GCTCGGTTGC TCAGTCGGCG GCGGCGGCGC AAGCGTTGGC CCAGGCGGCG
GGGGTGAGAC CGCCGGAAAA TGGGCGGTTG GCCAGTCAGT TAATGCTGGC TGCTGAGAAT
GTGGCGGACC ATTTAACCCA CTTTTATCTC TTTTTTATGC CCGATTTTGC CCGTCCTATC
TATGCCGGGC AGCCCTGGTA CGAGGGGGTG TTAAAGCGGT TTAAAGCGGT GGATGGTGCC
GCTTCGCGGG TGGCCTTGCC AGCGCGGGCA AGCTTTCTTC ACCTAATGGG AATACTGGGG
GGGCGCTGGC CCCACACCTT GGCATTGCAG CCAGGGGGCT CCACCCGTGG TTTGGAGGCG
CGGGATAAAA GTCAACTGCG GGGGGTGGTG GCGGGCTTTC GGGCCTTTTT GGAAGAGACC
CTGTTTGGGG CGTCCTTAGA GTCGTTGGTA GCCCTGGAGA GTGGGCAGTC GCTGCTGGCT
TGGGCCGCTG AGCAGCCCTG CCAGAACAGT GACTTTCGTT GGTTTTTACA GGTGGCCGAA
ACGCTTGAGC TGGCGCAGTT GGGGCGGGGT CATGATGGGT TTATGAGCTA TGGAGCTTAT
GGCCAAGGTG AAGAGGCGCT GTTTGCGGCG GGGGTTTGGC AGCAGGGGGG CTTGAGGGCG
CTGGATCCTG GGGCCATTCG AGAAGATGTC AGCCACGCCT GGATGCACCC CGACCGTGAG
CCCCGCCACC CTTTTGAGGG ACGCACGCTG CCGGATGCCG AGCAGCCCAA TGGTTACAGC
TGGTGCAAGG CTCCCCGTTT AAACGGTCTA CCGATGGAGG TGGGGGCGCT GGCGCGGCAG
CAGGTGGCGG GCCATCCGCT GGTGCGGGAT CTGGTGGCTC AGAGTGGGGG TAATGTGCGT
AATCGGGTGA TTGCCCGGTT GTTGGAAATT GCACGGGTGG TGTTGGCCAT GGAGGGGTGG
ATTGCCCAGC TTGAGCCACG CGCACCGTTT GGTGTGGAGT CCCCACTGCC GGAGCAGGGG
CAGGGGGTGG GGCTGGTGGA GGCGGCACGG GGTGGTTTGG GCCATTGGTA CCGTATGGAT
AAGGGGCGTT TAAGCCATGC GCAGATTGTC GCCCCGACCA CCTGGAATTT CTCGCCAAGG
GATGCCGCAG GGGTGCGTGG TCCACTGGAG CAGGCGCTGC TCAATAGTCC CATTCGTGCC
GGAGAACAGG ACCCCGTGGC GGTACAGCAC ATTGTGCGAT CCTTCGACCC CTGCATGGTC
TGTACGGTGC ATTAA
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| Protein sequence | MSKRQILGPF SRVEGDLEVQ IERHHNRVAD AWVVSPLYRG FERMLVGKEP QDALVYVPRI
CGICSVAQSA AAAQALAQAA GVRPPENGRL ASQLMLAAEN VADHLTHFYL FFMPDFARPI
YAGQPWYEGV LKRFKAVDGA ASRVALPARA SFLHLMGILG GRWPHTLALQ PGGSTRGLEA
RDKSQLRGVV AGFRAFLEET LFGASLESLV ALESGQSLLA WAAEQPCQNS DFRWFLQVAE
TLELAQLGRG HDGFMSYGAY GQGEEALFAA GVWQQGGLRA LDPGAIREDV SHAWMHPDRE
PRHPFEGRTL PDAEQPNGYS WCKAPRLNGL PMEVGALARQ QVAGHPLVRD LVAQSGGNVR
NRVIARLLEI ARVVLAMEGW IAQLEPRAPF GVESPLPEQG QGVGLVEAAR GGLGHWYRMD
KGRLSHAQIV APTTWNFSPR DAAGVRGPLE QALLNSPIRA GEQDPVAVQH IVRSFDPCMV
CTVH
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