Gene Mmc1_2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2434 
Symbol 
ID4482956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3103521 
End bp3104705 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content56% 
IMG OID639723182 
Productglycosyl transferase, group 1 
Protein accessionYP_866340 
Protein GI117925723 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0597525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGG GGGGGGGAAA CGTAGCTAGG CGGCGCATCT TGGTCATCTA TGACTATTTT 
GAGCCCGCCA CTCAAGCCGG TGGTCCTACC CTCTCTTGTA TCAACTTGGT GCGTTTTTTA
GAGCCCATGG CCGATCTTTG GGTGTTGACC GGTTGGCGGG ATTTGGATGG CACTCCGTTG
CCGGTGCAAC GGGACCGTTG GTTGCCTTGG GGGGCGCGCA GTCAGGTGTG CTATGCCCAT
AAAGGGTGGT CAATGCTGGG GGTATGGCGG ATTTTGCGTC AATTGCAGCC CGATGTGCTC
TATTTAAACG GGGTGTTTTC TCCTTTGGGC ACTTTGCTAC CGCTGTTTTT GCAGCGCTGG
TTGTTGCCGG AGTGCCGGGT TATTTTGGCC CCTAGGGGGA TGTTGCAATC CCAGGCATTG
GCGGTAAAAG CCCTAAAAAA AAGGCTCTAT CTGCAAGGCT TGTTGCTGCC ACTGTTGCGC
CGCCGGGCCT TGACTGTGCA AGCCACAGGG CCCGCAGAGT GGGCGGATAT GCAACGGTTA
TTACCTGTAG CCGATCCAAG TGCGCTGGTG CTGTTGGGTA ATTTGCCCCG CATGGGCATA
GCCTGTCGCG TGGGCTATCG GCCGGCGGCC ACACGCAGTT TGGTAACCGT GGCGCTGATC
TCACCTATGA AAAATATTCT TACGGTGTTA CAGGCGTTGG CGCAGGTACA ACAGCCTATG
CACTATCATC TGTATGGTCC GGTGAAGGAT GCCCCCTATT GGCAGCACTG TTTGCAAGCG
GCCCAAAAAC TGCCTGCTCA TGTGGGGTTT ACTTATCATG GTCTCTGCCC CCCGGCGGAA
GTGCCCGCGC GGTTGGCCGC GTATGATGTT TATGTGCAGC CCAGCCGCAG TGAAAATTTT
GGGCATGCCC TGTTTGAGGC GCTCATGGTG GGGTTGCCTT TAGTGACCAG TTACACCACC
CCCTGGCAGC AGCTACAGCA CAAGCAGGCA GGCTGGAACG TGGCGGGGGA GGATGTAGCG
GGGCTTGCGG CGATTTTGGA TGAAGCGGCT CAGTTAAAGC CTGAACGCTA TGCTGTAATG
GCGGGCCATG CACGCCAATT GGCGGAAAAT TATCTGCAAC AAAGTGGGCT AGAACAGGGT
TATCGGCAAT TGTTCCAAGT AACGATGGGT AATGCGCAGC TATGA
 
Protein sequence
MMKGGGNVAR RRILVIYDYF EPATQAGGPT LSCINLVRFL EPMADLWVLT GWRDLDGTPL 
PVQRDRWLPW GARSQVCYAH KGWSMLGVWR ILRQLQPDVL YLNGVFSPLG TLLPLFLQRW
LLPECRVILA PRGMLQSQAL AVKALKKRLY LQGLLLPLLR RRALTVQATG PAEWADMQRL
LPVADPSALV LLGNLPRMGI ACRVGYRPAA TRSLVTVALI SPMKNILTVL QALAQVQQPM
HYHLYGPVKD APYWQHCLQA AQKLPAHVGF TYHGLCPPAE VPARLAAYDV YVQPSRSENF
GHALFEALMV GLPLVTSYTT PWQQLQHKQA GWNVAGEDVA GLAAILDEAA QLKPERYAVM
AGHARQLAEN YLQQSGLEQG YRQLFQVTMG NAQL