Gene Mmc1_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2429 
Symbol 
ID4480993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3098476 
End bp3099735 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content56% 
IMG OID639723177 
Productglycosyl transferase, group 1 
Protein accessionYP_866335 
Protein GI117925718 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGA TTGTCATCGT TTCGGGCTTT CAGATTATCA GCAATCCTCG TGTTGCTAAA 
GAGGCCGATG CGCTGTCTAA AGCGGGTCAC ACGGTGGAGG TGTTGGGTGC CATATGGGAT
AAGGAGGGTG CCCGTAAAAT AGAGGCGTTA AGGGTTGGCG CGTTGTGGCA CTATACCCCG
ATGGTGGATT TGGCTGGGGG GGGCTGGTTG GCCCGTTGGC ACTGGCTGGT CGCGCGGTTG
CACGTGAAGC TCGCCCAAGG TGTGCGGCGC TGGCTGGGTT GGGAGCATCC GGCCCAACTG
GGTTATTTTA CGGGCCGCTT GCTTAAAATT GCGCGCAGCC GCCAAGCGGA TCTCTATATT
GTGCATCTTG AACCCGCTTT GTGGGTTGGG GTTAAGCTCT TGCAGGCGGG CTTTCGGGTG
GCGGTGGATG TGGAGGATTG GTACTCTGAG GATCTGCTGC CCGCAGACCG CAGTAGGCGA
CCGGTGGCGA TGATGCGCCA CTACGAAGCC ACGCTTTTGC AACAGGGTGC CTATGCCACC
ACCACCTCTC ACGCTTTAAG TCAGGCGTTG GCCAATGCTT ACCAGGTGTC GCCACCGGTG
GTTGTCTACA ACACCTTTCC GTGGGCGGAG CGAGCGAGCC TAAAGGGTCA CTATCGGGCG
CGTAAACGGC TGGATCTTTG CTCTTTGGTG TGGTTTTCCC AGACCATTGG GCCAGGGCGG
GGGCTAGAGC AGTTGATGCA AGCGCTGCAT TTTTTGCAAA CCCCTGTGGA GATTCATGTG
CGGGGCAATC CACGGCCTGG ATTTGAACAG CAGCTCCGGC GTTTGGCTCC CGAGGCGATG
CAAGAGCATA TCTATTTTCA TGGCTTGGTG CCTCAAGCGG AATTATTAGC CTGCTTGGCC
GAGCATGATA TGGGGTTTTG TGGCGAGTTG AGTGACAGTG CCAGCCGTGA TCTGACATTA
ACCAATAAGG CCATGGAATA TCTGCGTGCA GGGTTGGCGG TGATCGCCAG TGATACCCAA
GGGCAGATGG AGTTAGCCAA GGCATTACCT GACACGGTGT TTATCTATGC CCAGCGCGAC
CCGCAAGCAT TAGCCGACAA AGTGAACCTC CTTGTAGATC AACCGCAGCG TTTGCAGCAG
GCCAAACAGG CGGCACTGCA AGCGGCACAG CAACGCTTTT GCTGGGAGCG GGATGCGGAG
AAAATTGTGA CGTGTGTACA GTGCGCTCTT GCAGAAAGAG GGGTTACATC TTGCTCTTAA
 
Protein sequence
MSKIVIVSGF QIISNPRVAK EADALSKAGH TVEVLGAIWD KEGARKIEAL RVGALWHYTP 
MVDLAGGGWL ARWHWLVARL HVKLAQGVRR WLGWEHPAQL GYFTGRLLKI ARSRQADLYI
VHLEPALWVG VKLLQAGFRV AVDVEDWYSE DLLPADRSRR PVAMMRHYEA TLLQQGAYAT
TTSHALSQAL ANAYQVSPPV VVYNTFPWAE RASLKGHYRA RKRLDLCSLV WFSQTIGPGR
GLEQLMQALH FLQTPVEIHV RGNPRPGFEQ QLRRLAPEAM QEHIYFHGLV PQAELLACLA
EHDMGFCGEL SDSASRDLTL TNKAMEYLRA GLAVIASDTQ GQMELAKALP DTVFIYAQRD
PQALADKVNL LVDQPQRLQQ AKQAALQAAQ QRFCWERDAE KIVTCVQCAL AERGVTSCS