| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2411 |
|---|
| Symbol | |
|---|
| ID | 4482180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3077896 |
|---|
| End bp | 3078900 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639723159 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866317 |
|---|
| Protein GI | 117925700 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.150142 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGC TGTTTTTTAT GATGGTTAAG ATCGCCGTCG CCAGTGGCGC TATCCTATGG
TTGGTACGGG AGGATAAGCT GGATCTGGCG GCCATGCCGG TGCTGATGCA TACCCCCTTT
ATCCTGCTGC TGGCGGTGCT GTTGACCCTG TTGGCCTTTA TGGTGGCCTC GCTGCGGTGG
TGGCTGTTGC TGCGGATTAA ACAGATCAAT ATGGGCTTTG GCGCGGTGGT GCAGATTGTC
TTTATTACCA ATTTTTTTAC CACCTTTATG CCCGGTGGTA TCCTGAGTGC GGATCTGATT
CGTCTGGGTT ACACCTTTAA AAGTGCCCCA GAAAAACGTA CCGAAGGTGC GATTTCAGTC
TTTACAGACC GGTTTGTGGC GCTGTTTTCC ATCTTTTGCA TGGGCACCGT GGTCGGGCTT
TTTCAGCAGG AGAGCCTGCT ACGTGAACCG GTCTTGCGCG GTCTGTGGGG GGTGAGTGCC
AGCTCCATCA CAATTGCCCC GATAGTGCTG GTGGTGCTCT ATCGACTGGC TCGACGGGTC
CCCTTTTTCC AGCGTATTGT GCAGGGTGAG CTGCAAGGGC CACTCTATGA GATCATTAAA
CGCATGGTGT TGGCGGTGCG CATCTACCGG CAAAATATCG GCACCTTGAT AACCGTGCTG
CTGCTCTCTA TGGTGATGCA TGTTTTGATT ATAGGGACCT TTATTTTATT TGCTCGGGTG
ATGGTGCCCC TCGCCCCCTT GCAGCCTCTG GACTATATGT TTGCCGCCCC TTGGGCATGG
ATCGCCTCGT TGCTGCCGGT CTCTCCTGGT GGTTTGGGGG TAGGGGAGGC GGCCTTTGAC
CAAGTTTGCC GTATGTTGGA TGGTGGTGGG GCGGTGTTTG GTTACGCCTC GCTCTATCTG
GCCTTTCGGA TTTTGAGCGC ACTCTGTTCA CTGCCCGGCG CCGTCATTTA TTTGATCTAT
CGCAGCCGGG TGCAAGCGGT TATGCAGGAA AAGATGCCGG CTTGA
|
|---|
| Protein sequence | MQKLFFMMVK IAVASGAILW LVREDKLDLA AMPVLMHTPF ILLLAVLLTL LAFMVASLRW
WLLLRIKQIN MGFGAVVQIV FITNFFTTFM PGGILSADLI RLGYTFKSAP EKRTEGAISV
FTDRFVALFS IFCMGTVVGL FQQESLLREP VLRGLWGVSA SSITIAPIVL VVLYRLARRV
PFFQRIVQGE LQGPLYEIIK RMVLAVRIYR QNIGTLITVL LLSMVMHVLI IGTFILFARV
MVPLAPLQPL DYMFAAPWAW IASLLPVSPG GLGVGEAAFD QVCRMLDGGG AVFGYASLYL
AFRILSALCS LPGAVIYLIY RSRVQAVMQE KMPA
|
|---|
| |