Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2408 |
Symbol | |
ID | 4482177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3074732 |
End bp | 3075448 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639723156 |
Product | NUDIX hydrolase |
Protein accession | YP_866314 |
Protein GI | 117925697 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.668213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.23616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAA GCTTTACCAC CACCTCTTTT AGCAAGCCCC CGGCGCTGGT GCTGGGGCCT GACTATTGTT GCCCCCCCGC CCTGCAACAA CCGGTGGATG CCCTATGGGC AGAGCAAAAG CAGCAACGGG GCGAGCGCCT AACCGATGGC ACCCTCTACC ATCTGGCGGA AATCGCTCCG CATCAGCTTA TTCTGCAAAG CACCCGCTAC CGCTACTATG TCGCCCGCTT AGAGCGGCCC CACTGGGTTG AAGAGGGACT CACCATCCAG CCTCTCGCGG TGACGGGTCT GCTGAGCTGC GCCGATGGGA TTGTGTTGGG GCAGCGCGGC GGGCAGGTTA TCACCAATCC CGGCTACTGG GAGCTCTCCC CGGCGGGCGG TCTGAACCAA GCCGACCCCA TCGCGGTCCT CTACGAGGAG CTGCACGAAG AGTTGGGTTT ATCCCCCGCC ATGTGTGATG AACCGCAATT GATCGGCCTG TTGGGCAATC CAGACAACGG CGTGCATGAC CTGCTCTATC GGCTGCACAC CCCCCTGCCT GGGCAGGCCA TTCGCACCCA TCAACAGCAA CAGGGCAGTG ATGAATATGG GGCATTGCGG ATTCTTGCCC CCACCGATTT ACCCCGCTTT CTCCAACAAA ACCGGCAACA ACTGGTACCC GAACTGCTGC CCATGCTCCA ATTGGCGAAG CTGCTACCAG GGGACTTTGT GCTTTAA
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Protein sequence | MAPSFTTTSF SKPPALVLGP DYCCPPALQQ PVDALWAEQK QQRGERLTDG TLYHLAEIAP HQLILQSTRY RYYVARLERP HWVEEGLTIQ PLAVTGLLSC ADGIVLGQRG GQVITNPGYW ELSPAGGLNQ ADPIAVLYEE LHEELGLSPA MCDEPQLIGL LGNPDNGVHD LLYRLHTPLP GQAIRTHQQQ QGSDEYGALR ILAPTDLPRF LQQNRQQLVP ELLPMLQLAK LLPGDFVL
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