Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2361 |
Symbol | |
ID | 4481525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2997292 |
End bp | 2997810 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639723109 |
Product | RND multidrug efflux membrane fusion protein MexE precursor |
Protein accession | YP_866267 |
Protein GI | 117925650 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.439727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCA ATAAAATCTT TACCGCCGTA GCGGGCGTGT GGCTAACCTT CTCTGTGGCC CACGGGGCGG AGCGCCAATT AAGCTTTGCG GTGGATGGTG TGGTGACACG ACTGTTGGTT AAACCCGGTA TGCAGGTGCA GGCGGGTACT CCCTTGGCCG AACTTGATCG GCGGGTGTTC CAGGCTGAAC TGGAGGCCGC GACCCAGCAG CATAAAGCGG CCACCCTAAA TTATGAGCTG GCGCAACAGG GCTGGCAGCG GCTGCGTCAG TTGTATGATG ATCTCAATGC CTCTAAGCAG GAGTTGGAAG AGGCCCAACT GCTGCTGGCC CGTGCCAAGG CCGAACAGGC TGCCACCCAC CGGGATCTTA CCCTTGCGCA GTGGCGTCTG GGTTACAGCC AGCTTGTGGC CCCAACGGCA GGGCGCATCC AAGCGATCCC TGGATTTGTC GGGCAGGTGC TCAATGCACA GAGCGGTATG GCACCGGTAA TTATCCTGGA AACCAACATA AAAGAGTGA
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Protein sequence | MLRNKIFTAV AGVWLTFSVA HGAERQLSFA VDGVVTRLLV KPGMQVQAGT PLAELDRRVF QAELEAATQQ HKAATLNYEL AQQGWQRLRQ LYDDLNASKQ ELEEAQLLLA RAKAEQAATH RDLTLAQWRL GYSQLVAPTA GRIQAIPGFV GQVLNAQSGM APVIILETNI KE
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