| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2319 |
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| Symbol | |
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| ID | 4480939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2950168 |
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| End bp | 2951277 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639723067 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_866225 |
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| Protein GI | 117925608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.245464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.624104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAC GTGAAACCCT CTCCCTGGAT CTGGGAGACC GCAGCTATGA GATCGTGATT
GGTGAAAATG TGCTGGCCAG TTTGGGGGCG CGTTTAAAAC CGATGCTCAA AGGTCGGCAG
ATTGGTTTAG TGACCAATGA GACCGTAGCC CCACTCTATG CTGAAACGGT CATTCGCAGC
TTGGAAGAGG CGGGTTTTCA GGTCACACTG GTGATTTTGC CCGATGGCGA GCGCTATAAA
AATTGGGAGA CCCTCAATCT CATTTTTGAT GCACTGATTG GTGCCAAGTT TGAACGCCAA
GGGGCGATTG TGGCGCTGGG GGGCGGGGTG GTTGGGGATA TGGCGGGTTA TGCGGCGGCC
TCATTACTGC GGGGGGTGCC CTATGTGCAG GTACCCACCA CGCTGCTCGC GCAGGTGGAT
AGTTCGGTGG GGGGGAAAAC CGGCATTAAC CACCCCTTGG GCAAAAACCT GATTGGTGCC
TTTTATCAAC CCAAGTTGGT GTTGATGGAT TTGGCGACCC TGCACACGCT GCCCAAGCGG
GAGTTGTTGG CGGGACTGGC CGAGGTGATT AAGTATGGCA TTATCTGGGA TGAGGCCCTG
TTTCAGCAGT TAGAGGAGCA ATTAGAGCCC CTGCTGGCGC TGGATTATGG GGTGTTGGCT
AAGGTGGTGC ATCGTTGCTG TGTGATCAAG GCCGAGGTGG TGGCCAAGGA TGAGCGGGAA
ACGGGGGTAC GGGCCTTATT AAATCTGGGT CATACCTTTG GACATGCGAT TGAAAATTTG
GCAGGTTATG GTGAAAACCT GCATGGCGAA GCGGTCGGTA TGGGCATGAT GATGGCGGCG
CACATGGCCT ATCTGCGGGG CATGGTGGAT GCCGCTTTGG TTGCAAGGGT GCGGGCTTTG
ATTGTGCGGG CGGGCCTGCC GGAGTTTCCC GCGCAGCGCC AGCCGTTGGC GGCCTATTTG
GATGCCATGG GGCGCGATAA AAAGGTGGTC GCGGGTAAGA TGCGTTTTGT ATTGCCCACG
GGTATGGGCG CTGCGGTAGT GGTGGATGAT GTGACCGATG CCAGTCTGGC TCAGGTGTTA
GCCCCCTATG CGTCGGATGT GCAAAACTAA
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| Protein sequence | MSVRETLSLD LGDRSYEIVI GENVLASLGA RLKPMLKGRQ IGLVTNETVA PLYAETVIRS
LEEAGFQVTL VILPDGERYK NWETLNLIFD ALIGAKFERQ GAIVALGGGV VGDMAGYAAA
SLLRGVPYVQ VPTTLLAQVD SSVGGKTGIN HPLGKNLIGA FYQPKLVLMD LATLHTLPKR
ELLAGLAEVI KYGIIWDEAL FQQLEEQLEP LLALDYGVLA KVVHRCCVIK AEVVAKDERE
TGVRALLNLG HTFGHAIENL AGYGENLHGE AVGMGMMMAA HMAYLRGMVD AALVARVRAL
IVRAGLPEFP AQRQPLAAYL DAMGRDKKVV AGKMRFVLPT GMGAAVVVDD VTDASLAQVL
APYASDVQN
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