| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2210 |
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| Symbol | |
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| ID | 4482277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2817403 |
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| End bp | 2820546 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722955 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_866117 |
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| Protein GI | 117925500 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.129844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCTC TTTACATCAT TGCAGTCGGT CTGGGCGGTG CCTTTACGTT AGGTTTTCTA
AATAAAAATC AGCGTAATAC TGCCTATCTC ATTACTTTGG CTGCGCTCGC CTGTATGGGT
GCTGTGGCCA GCGAATGGTT GTGGGCCTTT AGCTTTTTAG GGGCTTCAGC GGTTGAGATC
CAAACAGCGG GTACGGTGCC CCCCTTTGCC ATTAACTTGC GCATGGGTAT GTCCGAGGCG
GCCTTGTTAA CCCTTATCAC CGCTACGGGT TTGCTCTCTG CGCTGCACAT GCGCGAGGTG
TTGTTGCGGG TGGGACAGCG GGGCATGGCG GTGCTGCTCA TCTTTGTCAT GGGGCTAAGT
GGCATTATCC TCACCCGCGA CATATTTAAC CTCTTTGTGT TTTTCGAGCT GGTGGTTATC
GCCACCGGGG GGCTGGTGTT GCTCTCGGAC GATAAACGCT CACTGGGGGC AGGTTTTAAA
TATTTGATCA TCTCCCAGGT TATCACCATC CTTATGTTGG TGGGGATAAC GTTTATCTAC
CACGCCACCG GTACCCTTAA TATTGATGGT ATGAGTGGGG CTTCCTTACA AGGCGGGGTG
GATCTGGCCA TCATGAAGGG CGGGGCGGTG GCCTTCTTCT GCCTGTTTAT TGCGGTGATT
GCCGAATTAA AACCCTTTCC CGCGAATGGT TGGGCGTTGG ATATTTATGA ATCGGCCCAT
CCATCCTTTG CTGCGCTTTT CTCCGCAGCT TCGGCCTCGG CAGCGCTGAT CGCCGTGGAT
AAAATTTTGC TCATTGGTGG TGCCCAGTGG CATCTGGTGG CCACCGCGGT GGGAATTGTC
ACCTTTGTGG CCTCGAACCT GTTTGCTCTG ACGCAAACCT GTGATCGCCG TATGTTGGGT
TACTCATCGG TGGCGCAAGT GGGCTTGGTG TTGACGGTGA TCGGTCAGAA AAACCTGCTG
GGGGATAACT ACCTCTATGT CGCCGGCGGT ATTTTGCTTG CCCATGGGGT GGGTAAGGCT
GGCCTCTTTT GGCTCTCTGG TTTGGTGGCC CAACGCAATC TGACCGCTTG GAGCGCGCTG
CGCGGACATC CTTTGCTGAT CTTTAGCTTT GTCACCTTCG TGGCGTTGCT CACCGGTTTA
CCGCCTTTCC CTGGTTTCTA TGCAAAATGG GACCTTATGC ATGCTCTGGC AGGCAATGGT
AAGTTGGTGC TGATGGGTAT GATCCTGTTT GGTGCCCTTA TGGAAGCAGG CTATCTGCTG
CGCTGGTTTG GCTATGTCCT CAAACGTGAG CAACCTGCTG AGCCCGTAAC GCATGATCTG
TTAAAGCAAG GCGTGGTGTT GGTGGCCGCC CTCGCGGGCT GGGCATTGGC TTATCAGTGG
GGTAGTTTGT CGGCCCACGG TAATCTATTG CATGCCCTAC CGTTGCTGTT TGCCCTGAGC
TTTTTGCTGC TGGAGTGGTT GCCTGCCTGG GTGAAAAACA GTTTGGCCAT TGCGGGTATG
AGCTACTACT TTTCGCAACA TTTTACCGAG TACGATCCAC TGCACCTGAT CTTTGCGGCG
ATTATCTTGA TTGGTGGGGT GGTGACACTG CTGGCGGGGT ACCATGCCCA TGGTCGCCGG
GTTGGCTTTT TCCCCTCGGT TATGTTGATG TTTGCCGGTT TAATTATGTT GGTTACGGCT
AAGGACTCGT TTAACTTTTT TGCCGCATGG GAGCTGCTGA CCGTTGGTTC CTACTTCTTG
ATTATGCGGG GTAAAGAGTC AGAGCCCCAT GCGCTCTCTT ATGTGCTCTT TTCGTTGGGC
GGGGCCTTTT TAATTTTGGC TGGCTTTGCC ATCGCTGCTC AAGGTGGGCA ATCCATGGTT
CTTGGTGCGT TAGGTGGTTT GCCCGCCGCG ATTGCACCTT GGGTATTTGT ACTGTTAGCC
ATCGGTTTTA TGACCAAAAC GGCATCCATC GGTGTGCATA TTTGGTTGCC CGGCGCCCAC
GCTGAGGCTG AGACCGATGT TTCGCCCATG GTATCAGGCA TCTTGCTTAA AGCGGGACTG
TTTGGCTTTG TGGTTTTACT GCTTAATATG GGCCACCAGA AAATTCTGGG CGTTGATCTT
ACCCATGTGT TGCTGTGGAT TGGTGCGTTC TCGGCCCTGT TGGGTAACTT GATGGCCATT
TTTCAAGAGG ATGCCAAACG GTTGCTGGCC TACTCCTCCA TTGGTCAAAT GGGTTACGCC
CTGTTTGGTC TGGCCTTGAT GAACCATCTT GGTTGGCTGA TGGCGTTGAT GTTTGTGATT
AACCACTATG TTTACAAATC CATGCTGTTC TTGGCGGTGG GGGGTGTGGC GAAACGCACC
GGTACCCGTG CCATGTACCA GATGGGTGGG CTTATCAAGT TGATGCCCTT GTCGTTTATC
TCGGTCTTGG TGGGCATTAT TGCGGTTTCT GGTCTGCCGC CGTTGTCGGG CTTTGGTGGT
CGCTGGATCT TCTATAATGC CATTTTGACG GCTGAAACCC AGCTGCCCAT GGTGGTGCTG
TTCCTGGCCG GCCCCATTGC CTTCCTCTAC CTGTTCCGCC TGATCCATAC GATCTTCTTG
GGCCAGTTGA AGGATGAGCA CCGCCGTCTC AAAGAGGCCC CCTTCTGGAT TTTGGTGCCG
CAGATGATCT ATGTGGCGCT GTTGATGGTG GTGGCGCTCT TCCCGGGTAT GGTGCTGCGG
CGAGTGGATA GCTTCTTGGG TGGCTATTTC CCCGATCAAG GTTTGCATTG GGGGGAGGGT
ACGCTCATTA CCAGCCAGTT TGGTTACTGG AACCCTATCG CGATCATGGT CATTGTGGTC
TCTATCTTTG CCACGGTGTT GTTGCTCATG CTGTTTTTAC ACCGTAAAGC ACAGAAAATT
AAGCAGTTCA ATATTGCTTT TTCGGCTGAA CGCCCCTATC GGCCCGAAAC CACCCACTAC
GCTTGGAACT TCTATGCCCC TTATCGCAAG GCGCTGGGCA TTTTGACTGA GCCGGTGATC
GAGCGTTTCT GGGCGGCGAT CATGGATCTG TTGCACGGTA CCTCAGAGAT TTTCCGACGT
CTCTATACGG GTAATGGACA GACCTATGTG ACCCACTTTA TTGCCTTTGT GGCCATCGTC
TTCCTCTTTT CTGTGGGGGT CTGA
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| Protein sequence | MSPLYIIAVG LGGAFTLGFL NKNQRNTAYL ITLAALACMG AVASEWLWAF SFLGASAVEI
QTAGTVPPFA INLRMGMSEA ALLTLITATG LLSALHMREV LLRVGQRGMA VLLIFVMGLS
GIILTRDIFN LFVFFELVVI ATGGLVLLSD DKRSLGAGFK YLIISQVITI LMLVGITFIY
HATGTLNIDG MSGASLQGGV DLAIMKGGAV AFFCLFIAVI AELKPFPANG WALDIYESAH
PSFAALFSAA SASAALIAVD KILLIGGAQW HLVATAVGIV TFVASNLFAL TQTCDRRMLG
YSSVAQVGLV LTVIGQKNLL GDNYLYVAGG ILLAHGVGKA GLFWLSGLVA QRNLTAWSAL
RGHPLLIFSF VTFVALLTGL PPFPGFYAKW DLMHALAGNG KLVLMGMILF GALMEAGYLL
RWFGYVLKRE QPAEPVTHDL LKQGVVLVAA LAGWALAYQW GSLSAHGNLL HALPLLFALS
FLLLEWLPAW VKNSLAIAGM SYYFSQHFTE YDPLHLIFAA IILIGGVVTL LAGYHAHGRR
VGFFPSVMLM FAGLIMLVTA KDSFNFFAAW ELLTVGSYFL IMRGKESEPH ALSYVLFSLG
GAFLILAGFA IAAQGGQSMV LGALGGLPAA IAPWVFVLLA IGFMTKTASI GVHIWLPGAH
AEAETDVSPM VSGILLKAGL FGFVVLLLNM GHQKILGVDL THVLLWIGAF SALLGNLMAI
FQEDAKRLLA YSSIGQMGYA LFGLALMNHL GWLMALMFVI NHYVYKSMLF LAVGGVAKRT
GTRAMYQMGG LIKLMPLSFI SVLVGIIAVS GLPPLSGFGG RWIFYNAILT AETQLPMVVL
FLAGPIAFLY LFRLIHTIFL GQLKDEHRRL KEAPFWILVP QMIYVALLMV VALFPGMVLR
RVDSFLGGYF PDQGLHWGEG TLITSQFGYW NPIAIMVIVV SIFATVLLLM LFLHRKAQKI
KQFNIAFSAE RPYRPETTHY AWNFYAPYRK ALGILTEPVI ERFWAAIMDL LHGTSEIFRR
LYTGNGQTYV THFIAFVAIV FLFSVGV
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