Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2184 |
Symbol | |
ID | 4483925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2738842 |
End bp | 2740422 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722929 |
Product | transposase IS66 |
Protein accession | YP_866091 |
Protein GI | 117925474 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000882375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGC TACCAAAGAC ACTCCCTGAT GACCCTGCCG CTTTGCGGGA AATAATACTT TCCTTGCAGG CTGAAAATGT CCTTTTACAG GACAAAAGCA AGCGTATGGA GCATGAAGCC CAGCTTCTGA GGGAGAAGCT GAATATTCTC ATTGCCAAGC GGTTTGGGCG TTCCAGTGAG AAGAGCGATC CCCGTCAGTT GGGTCTGTTC GATGAGGCAG AAGTGACGGC TGCCGAGGAA CCTGAAGAGG ATGCCGAAGA GATCCAGGTT CCTGCCCATA GCCGCAAAGT GAAGTCCAAA GGGCGCAAGC CATTGCCAGA GTGGCTACCC CGGGTGGATA TCATTCATGA GTTGCCTGAG TCGGCATTGG TTTGTGGCCT GGATGGTCAC CATTTGGTCG AGATTGGCCG TGAGACCAGC GAGCAACTGG ATATTATTCC GGCCAAGGTG CAGGTATTGC GGCACATCCA GATCAAATAT GGCTGTCCTC ATTGCAAACA GGGCGTGAAG ACGGCCCCTA CACCCAAACG TCCCATTCCC AAGGCGTTGG CTACAGCTGC TCTATTGGCC CATGTGGCGG TATCCAAGTA TGCCGATGGG TTACCGCTCT ATCGACAGGG CGCCATTCTG ACCCGTGCAG GGATTGATGT CTGTCGAACC ACGCTGGCCA ATTGGATGAT CCAGTGCGGC CAACTGGTGC AGCCGTTGAT CAATCTGATG CGGGACAAGA TGCTGGATTA CGATATCCTG CAGATGGATG AAACTACGAT TCAAGTGCTT AAGGAAAAAG ATAAAGTTGC ATCCAGCAAC TCCTATATGT GGGTACAGCG AGGTGGTCCC CCGGGTAGTC CGGTGATTTT GTTTGATTAC GATCCCACAC GCGGTGCCGA GGTTCCGAAA CGGCTGTTGG CGGGCTATAA AGGCTGGTTG CAAACGGATG GGTATGCAGG TTATCTGGGT GTGGGTGCGC AGGAAGATGT GATCCTGATG GGGTGTTTTG CGCATGCCCG TCGTCAATTC GACGAGGCGA TCAAAGCGTT GGGAAAATCC AAAAAAGGCA AGATAGGCAA GGCTGGGCAG GCACTGTCGC TGATCCGGAA ACTGTACGCT GTGGAAAAGG ATCTGCGTGA GGAAGAGGCT ACTCCAGAGC GACGTTACAA GGTGCGCCAG GAGCGTTCCC GCCCCATTAT CGATGAGTTG AAAACCTGGC TGGAAGATAA TCGAGCAGGG GTGTTACCGA AAAGCAAACT CGGCGAAGCG ATGGGATATC TGACCAATCA GTGGTCCTCT CTGATTCGAT ATCTTGATGA TGGACGCCTG GAAATTGACA ACAACAGAGC CGAGAACGCC ATTCGCCCCT TTGTGATTGG CAGGAAAAAT TGGCTCTTCA GCAACTCTGT TCGAGGTGCA AAGGCCTCGG CAAACCTCTA CAGTTTGATT GAAACGGCCA AAGCCAATGG TTGGGAGCCC TTCGTCTATC TCACAAAGGT CTTTGAGGGC CTCGCCACAG CGCAAACCGT GGATGAGTTC GACTTGTTGC TCCCGTGGAA TTTGAAATCT GCTGCTGAAC CGGCAGGGTA G
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Protein sequence | MKTLPKTLPD DPAALREIIL SLQAENVLLQ DKSKRMEHEA QLLREKLNIL IAKRFGRSSE KSDPRQLGLF DEAEVTAAEE PEEDAEEIQV PAHSRKVKSK GRKPLPEWLP RVDIIHELPE SALVCGLDGH HLVEIGRETS EQLDIIPAKV QVLRHIQIKY GCPHCKQGVK TAPTPKRPIP KALATAALLA HVAVSKYADG LPLYRQGAIL TRAGIDVCRT TLANWMIQCG QLVQPLINLM RDKMLDYDIL QMDETTIQVL KEKDKVASSN SYMWVQRGGP PGSPVILFDY DPTRGAEVPK RLLAGYKGWL QTDGYAGYLG VGAQEDVILM GCFAHARRQF DEAIKALGKS KKGKIGKAGQ ALSLIRKLYA VEKDLREEEA TPERRYKVRQ ERSRPIIDEL KTWLEDNRAG VLPKSKLGEA MGYLTNQWSS LIRYLDDGRL EIDNNRAENA IRPFVIGRKN WLFSNSVRGA KASANLYSLI ETAKANGWEP FVYLTKVFEG LATAQTVDEF DLLLPWNLKS AAEPAG
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