| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2099 |
|---|
| Symbol | |
|---|
| ID | 4480848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2571730 |
|---|
| End bp | 2572227 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639722843 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866006 |
|---|
| Protein GI | 117925389 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2914] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.534473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTG CGGTGACCTA TGCCCAACCT AATCGTCAAT TGCTGCTAGA GTTTGAGGTT
CCCGAGGGAA CCACCGCTCA GCAGGCGGTA GAGCGCTCGG GTATTTTGAG TAAGTTTCCA
GATATTAATC TGGCCGAGCA AAAGCTGGGT ATCTACGCCA AGTTGGTGGA GAATGATCAA
GTATTAGAAG AGGGTGATCG GGTCGAGATC TACCGGCCAG CCAAAGGTAA GCCCAAGAAA
AAAGAGCGTC CCGCAGCCAA GAGCGTGGCA GAAAAACCTG CTCAAGGGGC CGAGGCTGCC
GCAGGAGATG CAGATAAAGC GGCAAAGATA GCGGCCATTA AAGCCAAGGC CGCAGCGGCC
AAAGCCGCCA AGGGCGAGGA TGCTCAACCG GAGGCAGCCT CAGCCGACGA TAAAGCCGCC
AAAATTGCCG CCATCAAGGC CAAAGCCGCC GCGGCCAAAA AAGCCAAAGA TGCGGCTAAC
AAGGCTGAGC ATGCATGA
|
|---|
| Protein sequence | MRVAVTYAQP NRQLLLEFEV PEGTTAQQAV ERSGILSKFP DINLAEQKLG IYAKLVENDQ
VLEEGDRVEI YRPAKGKPKK KERPAAKSVA EKPAQGAEAA AGDADKAAKI AAIKAKAAAA
KAAKGEDAQP EAASADDKAA KIAAIKAKAA AAKKAKDAAN KAEHA
|
|---|
| |