Gene Mmc1_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2066 
Symbol 
ID4481329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2542030 
End bp2542320 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content51% 
IMG OID639722809 
Producthistone family protein DNA-binding protein 
Protein accessionYP_865973 
Protein GI117925356 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0151573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0307136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATGA CCAAAGCGGA TATCGTTCAG ACTGTTTACC ATCGGCTTGG TCTGTCCAAG 
AAAGAGTCTG CTGACGTCGT GGAGTCGGTT TTTGAGATTA TCCGCAGCCA ACTGGAAAGT
GGTGAGCCTG TTAAGATCTA CGGCTTTGGT GGCTTCAGTA TGCTGGATAA AAAACCCCGC
CAGGGTCGCA ACCCAAAAAC AGGGGAAGAT GTAGAGATAT CAGCGCGCCG CGTTGTAACT
TTCAAGGCCA GCCAGATCCT GTTGGATCGT GTGAATAAGG GCCCGAGCTG A
 
Protein sequence
MTMTKADIVQ TVYHRLGLSK KESADVVESV FEIIRSQLES GEPVKIYGFG GFSMLDKKPR 
QGRNPKTGED VEISARRVVT FKASQILLDR VNKGPS