Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2050 |
Symbol | |
ID | 4481784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2531961 |
End bp | 2533817 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639722793 |
Product | phage terminase GpA |
Protein accession | YP_865957 |
Protein GI | 117925340 |
COG category | [R] General function prediction only |
COG ID | [COG5525] Bacteriophage tail assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0184089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGT CCGCAGCGCA GATTTACGAA GATGCATTCC TTCAGGGGCT GATGCCCGAT CCGCGTCTGA CGGTCTCTGA ATGGGCTGAT GAACACCGCA TGCTCTCTTC GGTGGCCTCG GGGGAACCCG GCCCTTGGCG CACCGATCGC ACCCCCTATT TGCAGGAGGT GATGGACTCT CTTTCACCCA GTTCCCCCAT TGAGCGGGTG GTGGCGATGT TTGGTAGTCA GCTGGGCAAA ACCGAGTGTG GCCTGAACTG GGTGGGGTAT GTGATCCACC ATGCACCGGG TCCCATGCTG ATGGTTCAGC CCACGGTGGA GATGGCTAAG CGCTACTCCA AACAGCGGGT GGGACCGCTC ATTGAATCAA GTTCTGAGAT CCGGGAGCGG GTAAAACCGG CTCGATCTCG GGACAGTGGC AACACGGTGC TTTCCAAGGA GTTCCCTGGC GGCATCCTTT TGATGACCGG AGCCAACAGC GCGGTGGGGC TCTCCTCCGC GCCGATCCGC TATCTCTTCA TGGATGAGGT GGACCGTTTT CCAGGTGACG CTGATGGCGA AGGGGATCCG GTGGCGCTGG CGATTCAGCG CACGGCGAAC TTCTCCAATC GCAAGGTGCT GCTTACTAGC ACACCGACAA TCAAGGGCTT CAGTCGCATC GAAGCAGCTT ATGCAGAAAG CGACCAGCGT CAGTTCTGGG TACCCTGCCC AGAGTGTGGT GAATTCCAGG TGCTGACATG GGCCCAGGTG AAATGGCCTC ATGGTGAGCG AAAAGCGGCG TATTACCTCT GTCCACACTG TGAATCACAG CTGGCTGACC ATCAAAAGGG CTGGATGCTG GAAAACGGCG TCTGGCGAGC GGCGGCTGCT GGGGATGGGA AAACCGCAGG CTTTCACCTC TCCTCCCTCT ATAGCCCCCA TGGCTGGACC TCATGGGGGG ACATTGCGGT GGAGCATGGT CTGGTGCACA AGGATCCATC TCGATTAAAG ACCTGGGTCA ACACTAAAAT GGGGCAGTGT TGGGAGGAGC AAGGTGACCG TATCGATGGC GAAGGGCTCA TGGAGCGCCG AGAGGTCTGG GGCGAACTGC TCCCTGCTGA TGTGGCTGTA CTCACAGCTG GCGTTGATGT TCAGGATGAT CGTCTTGAAG TTGAAATCGT AGGCTGGGGC CGGGATGAAG AGTCCTGGTC CATTGACTAT CGGGTATTGT GGGGTGATCC CTCATCCCCA GCTGTATGGG AAGATCTGGA CAACCTGCTC CGTCACCCCC TTGGTCACAG TCGGCAGTTG CCAGATATGA CCATCCGGGC CGCCGCTATC GATACCGGTG GTCACCATAC CCTGAAGTCC TATGCCTTCT GCCGATCCAG GCAGGGCCGA AGGATCTGGG CCATCAAGGG GCGTGGTGGT CAGGGAGTGC CCATCTGGCC CCGTAAGCCC TCCACTAAAA ACAAGGGGAA GGTGCCGCTT TTCATTTTGG GTGTGGATGC CTGTAAAGAG GCGATCCTCT CCCGTCTACG CATTGAAGAG CCAGGACCGG GCTTTCTGCA CTTTCCCATG CAACGGGATG GGGACTACTT CAAACAGCTC ACCGCTGAAT CGGTGGTGAC CCGTTATCAC AAGGGCCGCC CCATTCGGGA GTGGAATAAG CGGGATTCCG ATCGCAACGA GGCCCTGGAT TGCCGTGTCT ATGCCATGGC GGCACTACAG GGGCTGATTG CCATGGGGTT TCGGCTCAAC ATGGCGGTTG AGAAGATCGC TGAACACCCT CTTAAAGATG CGATGCCTGA GCCCGGCAAA GTGCAGCAAA AGAAGATCAA ACCTAAACGC CGGGTTATTC AATCCAGTTG GGTCTAA
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Protein sequence | MALSAAQIYE DAFLQGLMPD PRLTVSEWAD EHRMLSSVAS GEPGPWRTDR TPYLQEVMDS LSPSSPIERV VAMFGSQLGK TECGLNWVGY VIHHAPGPML MVQPTVEMAK RYSKQRVGPL IESSSEIRER VKPARSRDSG NTVLSKEFPG GILLMTGANS AVGLSSAPIR YLFMDEVDRF PGDADGEGDP VALAIQRTAN FSNRKVLLTS TPTIKGFSRI EAAYAESDQR QFWVPCPECG EFQVLTWAQV KWPHGERKAA YYLCPHCESQ LADHQKGWML ENGVWRAAAA GDGKTAGFHL SSLYSPHGWT SWGDIAVEHG LVHKDPSRLK TWVNTKMGQC WEEQGDRIDG EGLMERREVW GELLPADVAV LTAGVDVQDD RLEVEIVGWG RDEESWSIDY RVLWGDPSSP AVWEDLDNLL RHPLGHSRQL PDMTIRAAAI DTGGHHTLKS YAFCRSRQGR RIWAIKGRGG QGVPIWPRKP STKNKGKVPL FILGVDACKE AILSRLRIEE PGPGFLHFPM QRDGDYFKQL TAESVVTRYH KGRPIREWNK RDSDRNEALD CRVYAMAALQ GLIAMGFRLN MAVEKIAEHP LKDAMPEPGK VQQKKIKPKR RVIQSSWV
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