| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2048 |
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| Symbol | |
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| ID | 4481782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2529942 |
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| End bp | 2531426 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639722791 |
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| Product | lambda family phage portal protein |
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| Protein accession | YP_865955 |
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| Protein GI | 117925338 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0169917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGT TTAAGCGCCT GTTTGGTAGT CCTCCCAAAC GCCGGGCAGG ATATGAAGGA
GCGGCATCCG GTCGGCGTCT GGGTAATTGG CAGCCCGAAG AGGCCGGGAT CAATGCCCTG
CTGTTTCGCG ATGCCACCCT CATGCGTGCA CGCTCACGAG ACTTGGTGCG CCGTAATGCC
TGGGCATCCA ACGCTGTAGA CTCTCTGGTT GGGAACCTTG TGGGTACCGG TATCAAGCCC
CAATCCACGG TAAAAGACCC CCAGATCAAA GCCCAGATTC AGTCTTTATG GCTGGCCTGG
ACAAAAGAGG CCGATGCCCA CGGCATGCTG GGCTTCTATG GCCTTCAGGC TTTGATTGCC
CGCGCTATGA TCGAGGGGGG CGAGGTGCTG GTACGGCTGC GCAATCGGGA TGCCCGCGAT
GGCCTCATTG TACCACTACA GTTGCAACTT TTGGAACCAG AGCATCTTCC AGCCAGTGAC
AGCCGGGATC TACCCAACGG GCATCGGGTA AGGGCTGGGA TTGAGTTTGA CAAGATCGGT
CGCCGGGTCG CCTACCATCT GTTTCGGGAA CACCCCGGTG AACAGCCCAT GCTGTTCAAA
GCGGGGGATA TGGTCCGGGT GCCAGGCTCA GAGGTGTGTC ACATCTTTAA ACCCCTACGC
CCTGGCCAAC TCCGGGGTGA GCCCTGGATG GCGCAGGCAC TGGTTCGGCT CCATGAGTTG
GACCAGTACG ATGATGCGGA GTTGGTACGC AAAAAGACCG CCGCGCTCAT CGCCGGCTTC
ATCACCAAAC CTGACCCCGA GTTGGGCGTC GGCGGTGAGG ACGGTCAGGA TCCTGATGAG
AACGGATCTG TCCCGGTCAC CTGGGCCCCA GGCACCATGC AGGTCCTGCT ACCCGGTGAG
GATGTAAAGT TCTCAGACCC TGCCGACGTG GGCGGTCAAT ACGGGGAGTT CATGCGCACC
CAACTCCGCG CTGTGGCGGT GGGCTTGGGA TTGACCTATG AACAACTCAC CGGCGACCTC
ACTGGGGTGA ACTACTCCTC CATCCGTGCT GGCATGGTGG AGTTTCGCCG TCGTATGGAA
CAGATCCAGC GCATGGTCTT GATCCATCAG CTTTGCCGCC CTGTATGGGA ACGGTGGATG
GATCAGGCTG TTTTATCGGG TGCTTTGCAA CTTCCCGAGT ACAGCAAACG CCGCCGTGAA
TATCTGGCGG TGAAGTGGAT ACCTCAAGGG TGGACCTGGG TGGATCCACA AAAAGAGATG
AACTCCATCA TCTGGGCGAT CCGGGCTGGT CTGCTCAGTC GGGCTGAAGC AGTCTCTACC
TACGGTTATG ACATCGAAGA GATCGACCGG GAGATCGTAG CCGATAACAA GCGTGCCGAT
GAACTGGGGC TGGTGTTTGA CTCTGACTCA CGGCGTACTT CCCGGTCGGG AGTATCACGG
GACAGCAAGC AGAGTGATAA GGAGTTGGTA GATCTTACCG AATAA
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| Protein sequence | MKLFKRLFGS PPKRRAGYEG AASGRRLGNW QPEEAGINAL LFRDATLMRA RSRDLVRRNA
WASNAVDSLV GNLVGTGIKP QSTVKDPQIK AQIQSLWLAW TKEADAHGML GFYGLQALIA
RAMIEGGEVL VRLRNRDARD GLIVPLQLQL LEPEHLPASD SRDLPNGHRV RAGIEFDKIG
RRVAYHLFRE HPGEQPMLFK AGDMVRVPGS EVCHIFKPLR PGQLRGEPWM AQALVRLHEL
DQYDDAELVR KKTAALIAGF ITKPDPELGV GGEDGQDPDE NGSVPVTWAP GTMQVLLPGE
DVKFSDPADV GGQYGEFMRT QLRAVAVGLG LTYEQLTGDL TGVNYSSIRA GMVEFRRRME
QIQRMVLIHQ LCRPVWERWM DQAVLSGALQ LPEYSKRRRE YLAVKWIPQG WTWVDPQKEM
NSIIWAIRAG LLSRAEAVST YGYDIEEIDR EIVADNKRAD ELGLVFDSDS RRTSRSGVSR
DSKQSDKELV DLTE
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