Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1982 |
Symbol | |
ID | 4481295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2460760 |
End bp | 2461668 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639722726 |
Product | transposase IS66 |
Protein accession | YP_865890 |
Protein GI | 117925273 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.583264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGA GGATAATTCT CCTTCATCCA CTGATCGAAA CCAAGATGCG GGACAAGATG CTGGATTACG ATATCCTGCA GATGGATGAA ACTACGATTC AAGTGCTTAA GGAAAAAGAT AAAGTTGCAG CCAGCAACTC CTATATGTGG GTACAGCGAG GTGGTCCCCC GGGTAGTCCG GTGATTTTGT TTGATTACGA TCCCACACGC GGTGCCGAGG TTCCGAAACG GCTGTTGGCG GGCTATAAAG GCTGGTTGCA AACGGATGGG TATGCAGGTT ATCTGGGTGT GGGTGCGCAG GAAGATGTGA TCCTGATGGG GTGTTTTGCG CATGCCCGTC GTCAATTCGA CGAGGCGATC AAAGCGTTGG GAAAATCCAA AAAAGGCAAG ATAGGCAAGG CTGGGCAGGC ACTGTCGCTG ATCCGGAAAC TGTACGCTGT GGAAAAGGAT CTGCGTGAGG AAGAGGCTAC TCCAGAGCGA CGTTACAAGG TGCGCCAGGA GCGTTCCCGC CCCATTATCG ATGAGTTGAA AACCTGGCTG GAAGATAATC GAGCAGGGGT GTTACCGAAA AGCAAACTCG GCGAAGCGAT GGGATATCTG ACCAATCAGT GGTCCTCTCT GATTCGATAT CTTGATGATG GACGCCTGGA AATTGACAAC AACAGAGCCG AGAACGCCAT TCGCCCCTTT GTGATTGGCA GGAAAAATTG GCTCTTCAGC AACTCTGTTC GAGGTGCAAA GGCCTCGGCA AACCTCTACA GTTTGATTGA AACGGCCAAA GCCAATGGTT GGGAGCCCTT CGTCTATCTC ACAAAGGTCT TTGAGGGCCT CGCCACAGCG CAAACCGTGG ATGAGTTCGA CTTGTTGCTC CCGTGGAATT TGAAATCTGC TGCTGAACCG GCAGGGTAG
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Protein sequence | MNVRIILLHP LIETKMRDKM LDYDILQMDE TTIQVLKEKD KVAASNSYMW VQRGGPPGSP VILFDYDPTR GAEVPKRLLA GYKGWLQTDG YAGYLGVGAQ EDVILMGCFA HARRQFDEAI KALGKSKKGK IGKAGQALSL IRKLYAVEKD LREEEATPER RYKVRQERSR PIIDELKTWL EDNRAGVLPK SKLGEAMGYL TNQWSSLIRY LDDGRLEIDN NRAENAIRPF VIGRKNWLFS NSVRGAKASA NLYSLIETAK ANGWEPFVYL TKVFEGLATA QTVDEFDLLL PWNLKSAAEP AG
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