Gene Mmc1_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1974 
Symbol 
ID4481287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2452775 
End bp2453116 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID639722720 
Producthypothetical protein 
Protein accessionYP_865884 
Protein GI117925267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00264981 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA AATCAATTGA GGCGTCTGTG CTGAGTGAGA AGCAGCGGTA CTGGCTGGAT 
CATTTACGCA GTTGTCGTTC TGAGGTCGGC ACCATTAAGG AGTACGCTGA AGTCCATAAG
CTGAGCCTTC CATCGTTGTA TTTTTGGAAG CGCAAGCTGA CGCAAATGGG TTTTCTGGAA
GAGTCAGGAT CAGGCAAGCG ACGTTTTCAG CGATTGGAAT TGAGTTCAAA GTCTTCAGCA
GGGGTCTGCC GGATTCAGTT CCCAAATGGT ATGACGGTGG AGTGGTCAGG GAATGGTGGC
GAGAGCTTGC TCTCTGTCCT GCGATCTGTG GCAGCCTTGT GA
 
Protein sequence
MEDKSIEASV LSEKQRYWLD HLRSCRSEVG TIKEYAEVHK LSLPSLYFWK RKLTQMGFLE 
ESGSGKRRFQ RLELSSKSSA GVCRIQFPNG MTVEWSGNGG ESLLSVLRSV AAL