| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1971 |
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| Symbol | |
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| ID | 4481284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2451131 |
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| End bp | 2452252 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722719 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_865883 |
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| Protein GI | 117925266 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0139673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.752349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACAT TGGAGACGAG AGCAAAAATC AGACGGGATC GAGAGGTCCT GAAGAAGTCG
ATCAAGCAAA TCAGCAGAGA TCGACATGTT TCGCGCAATA CGGTGCGTAA GATATTGGAG
GAAGAGCCAG GTCAGGAGAT CGGCTACCAA CGTTCGATTC AACCTCGGCC TCAACTTGGG
CCGTATGTCG AAAGGTTGGA AAAGATTCTG GAAGCGGATT GGCCTCAGCC CCGCAAACAG
CGTCTGCAAG CAAAGCAGAT TTTTGAAACG TTGGCTTATG AGGGCTATCA GGGCGCATAT
GACAGCGTTC GCCGCTATGT AAAAGCATGG CGAACTGAAA AGGGAAGAAA CCCAGGCACA
GTATTTATCC CTCTCTACTT TGAGCCTGGA TCAGCCTATC AGTTTGATTG GAGCTATGAG
AGCGCCGTTC TGGGTGGAGT CCATCAAAGC ATCAAGGTGG CCCATTTTCG CTTGGCTCAC
AGCCGCATGA TCTTTGTGGT CGCCTTCCTG CGGGAATCCC TGGAGATGCT TCTGGATGCG
CATAACCGGG CTTTTAAGTT TTTTGGAGGT TGCCCCCACC AGGGTATTTA CGACAACCTC
TCGACAGCGG TGGATAAGAT TCTCAAGGGC AAGGAGCGCA CATTTAATAG CCGCTTTGAG
GCGATGTGCG ATCACTTTTT GGTAGAGCCC GTAGCCTGTA CGCCAGCAGC GGGTTGGGAG
AAGGGCCAGG TAGAGAAACA AGTCCGGGAT GTTCGCAACT GGTTTTTCAA ACCCATTCCC
CAGTTTGCTG ATCTGGAAGA GTTGAATCAC TGGCTTGCGG ACCGCTGTTG GGGATGGGCG
TCCACGCATC CTCACCCAGA ACAGAAACAG CGCACAGTAG CCGCCGTGTT TCAACAAGAG
CGGGAGCATC TGATCCGTTT CAGCCGCCCA TTTGACGCTT ATAAAGAGCG TGAGTGTCGC
GTCTCATCGA CCAGTCTGAT TCAATATGAC GGCAATCAAT ACAGCGTGGA GGCGATAGCC
GCGCGCAAGG CCGTTACCAT ACGGGCCTAT GCAGAACGAA TCATGGTGAT TCACAAAGGA
AAAGTGGTTG CAGATCATCT GCGCAATCTG AGCAAGGGGT GA
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| Protein sequence | MLTLETRAKI RRDREVLKKS IKQISRDRHV SRNTVRKILE EEPGQEIGYQ RSIQPRPQLG
PYVERLEKIL EADWPQPRKQ RLQAKQIFET LAYEGYQGAY DSVRRYVKAW RTEKGRNPGT
VFIPLYFEPG SAYQFDWSYE SAVLGGVHQS IKVAHFRLAH SRMIFVVAFL RESLEMLLDA
HNRAFKFFGG CPHQGIYDNL STAVDKILKG KERTFNSRFE AMCDHFLVEP VACTPAAGWE
KGQVEKQVRD VRNWFFKPIP QFADLEELNH WLADRCWGWA STHPHPEQKQ RTVAAVFQQE
REHLIRFSRP FDAYKERECR VSSTSLIQYD GNQYSVEAIA ARKAVTIRAY AERIMVIHKG
KVVADHLRNL SKG
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