| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1952 |
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| Symbol | |
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| ID | 4481180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2430454 |
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| End bp | 2431611 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639722702 |
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| Product | hypothetical protein |
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| Protein accession | YP_865866 |
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| Protein GI | 117925249 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4269] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000110513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0630235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCACC CCACCCTCAC AGCCCCCCTT GAGCACCCCA CTTTAGATGG CGATCAGATC
CTCCCCGAAC CCCCATTTCA TGCAACCGAC CCTCTGCTAC ACAGCCATCC GGTGACCTTT
CACGGCAAAG GCAGCGACTA CTTTAAAATA TGGTTTGTAA ACTGGGCGCT CACCATCGTA
ACACTGGGGA TCTACTCGGC CTGGGCCAAG GTGCGCCGTA ACCGTTATTT CTATAACCAT
ACTCTGCTGG ATGGGCACAA TTTTGATTAT ACCGCCGACC CCATGCGGAT CCTAAAGGGG
CGCCTAATCG CTGCTGCGAT TGTCATTCCC ATGTCTATTA TGACCTCGTC TCAAATCACG
CAGTGGATTG TGATCGGCAA TATCATCTAT TTTGGCCTTT CGCTCATGAT CCCAGTCATC
ATCGTCATGG CCATGCGCTT TTCCCTGCGC AACTCGGAAT ATCGGGGCAT CCATTTTAAT
TTTACCGGTA AAATTTCCCG CTCTTATGGC GTTTATATAC TATGGAGCAT TGCATCTGCT
TTAAGCGCGA GTTTGCTGCT CCCTGTCATG CTCAAACAGC AACAGGAATT TTTGCTCTTG
GGCAGCCGCT TTGGTCAAAG CAACTTTGAC GCAAAACCAC CCCTTGGCTC GCGTGCTTTT
TACAACGCCC TTTTTTACAG TGCCATGATC GCATTCGCTT GGATATTAAT GCTGTTTGTG
GCGGTAACCA TCTTTTTCTT AGTCGCTAAC CACACTTATT TGCCGCAGTT TGAAGATTCT
GTTATAAATG AAATCTATGG CATAATAGGC TTTGTTAGCC TGATCCCCCT TGTGCTTTTT
ACTGCCCAGA TCATGAGAGC TGCCATGTTT GCCATCATCT GGAACCAAGC CCATCTTCAT
GGCATTTATT TTCGATGCAA AATCAACATT ATAAAGGTTA GCTGGATCAT TCTTAGCAAC
CTACTGATGC GTCTCTTCTC GTTAGGCTTA CTCAGCCCAT GGTGTACCAT ACGCATAAAA
AAATATCTTT ACGAGTCGGT TCGTGTAGAG ATGAGCGCTG CCCAAAAACA GCATTTTCTC
GCCGATCACC AAAACAATCA ATCGGGCAGC CTCGCTGAGG GCGTCGATGA TCTTGTAGGG
TTTGATGTGG GTATTTAA
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| Protein sequence | MSHPTLTAPL EHPTLDGDQI LPEPPFHATD PLLHSHPVTF HGKGSDYFKI WFVNWALTIV
TLGIYSAWAK VRRNRYFYNH TLLDGHNFDY TADPMRILKG RLIAAAIVIP MSIMTSSQIT
QWIVIGNIIY FGLSLMIPVI IVMAMRFSLR NSEYRGIHFN FTGKISRSYG VYILWSIASA
LSASLLLPVM LKQQQEFLLL GSRFGQSNFD AKPPLGSRAF YNALFYSAMI AFAWILMLFV
AVTIFFLVAN HTYLPQFEDS VINEIYGIIG FVSLIPLVLF TAQIMRAAMF AIIWNQAHLH
GIYFRCKINI IKVSWIILSN LLMRLFSLGL LSPWCTIRIK KYLYESVRVE MSAAQKQHFL
ADHQNNQSGS LAEGVDDLVG FDVGI
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