| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1889 |
|---|
| Symbol | |
|---|
| ID | 4483588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2347556 |
|---|
| End bp | 2348281 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639722634 |
|---|
| Product | methylthioadenosine phosphorylase |
|---|
| Protein accession | YP_865803 |
|---|
| Protein GI | 117925186 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0005] Purine nucleoside phosphorylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.313662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.317044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCC AACGTAAAAT TGCCGTGATC GGTGGTACCA GCCTGTTGGA ATCCCATCTT
TTCAGCGGGG CTAAAGAGTA CCCCATTGCG ACCCCTTTTG GAAAAGTCAC CCTGTTGGAA
AAACAGGGCT TGGTCTTTTT ACAGCGCCAC GGGATGGACC ACTACACACC ACCACACTTG
ATTAACCATA AAGCCAACTT GGCGGGGTTA AAGGAGTATG GCATTACCCA TCTGCTGGCC
ATTGGCTCAG TGGGCAGCAT GAAGTTGGAG CACCCCCCCG GTACCTTTTT AATCCCGGAT
GATTTTCTAG GGCTGGATGT CTGTCCCACT TTTTTTGAAG ATGCCCGTGG CCATCAAGTC
CCTGGCTTTG ATCCCGCATG GCGGCAGCAG ATTTTAGCCG CATGGCCCCC CAGCGAATCC
TTTGGCGCTC CCGTTGACGG GGGTGTCTAC TGGCAGACCC GTGGCCCCCG TTTTGAAACC
CAGGCAGAAA TACGCATGTA TCAAGCCTTT ACCGATGTGG TGGGCATGAC GGTAGCCTCG
GAGTGCATTT TGGCCCGCGA GTTAGACCTC GCCTATGCAG CCATTTGCAT TGTGGATAAC
TATGCCAATG GTATCTCTGA CGAACCCCTC ACCTATGCGG CCTTTAAACA AAAGGTGGCG
GAAAATGAGG CACGCCTGGG CTCTCTACTG CATATTCTAC TGGAACGTCT CTCCTCCCAC
CCATAG
|
|---|
| Protein sequence | MSAQRKIAVI GGTSLLESHL FSGAKEYPIA TPFGKVTLLE KQGLVFLQRH GMDHYTPPHL
INHKANLAGL KEYGITHLLA IGSVGSMKLE HPPGTFLIPD DFLGLDVCPT FFEDARGHQV
PGFDPAWRQQ ILAAWPPSES FGAPVDGGVY WQTRGPRFET QAEIRMYQAF TDVVGMTVAS
ECILARELDL AYAAICIVDN YANGISDEPL TYAAFKQKVA ENEARLGSLL HILLERLSSH
P
|
|---|
| |