Gene Mmc1_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1884 
Symbol 
ID4483583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2343225 
End bp2343599 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content54% 
IMG OID639722629 
Productprotein translocase subunit secG 
Protein accessionYP_865798 
Protein GI117925181 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1314] Preprotein translocase subunit SecG 
TIGRFAM ID[TIGR00810] protein translocase, SecG subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00110105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.520144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGT TGATTACCGT ACTCCATGTT ATGGCGTGTC TGATCCTTAT CAGTGTGGTG 
CTGCTCCAAA AAGGCAGTGG TACCGATATG GGTGCTGCCT TTGGCGGTGG CTCTTCTCAG
AGCGTGTTTG GCGCTTCTGG TGGGGGCAGC TTTATGGGTA AATTTACCGC TGGAGTGGCG
GCGATCTTTT TGCTGAGCAG CATGACCTTG ACCTTTATTT CCACCAAAGG GAGCAATGCC
AGCTCGGTGA TGGATGGGGT AAAAGCGCCT ACGGCCCAAG AGCAAAAGCT GCCCGCTGCA
CCGGAACTAC CCTTGGTTCC CAAAGAGGCC AAACCGGTGG AGAATACCGG TAGCAAACCT
ATTCCTGTGG AGTAG
 
Protein sequence
MTLLITVLHV MACLILISVV LLQKGSGTDM GAAFGGGSSQ SVFGASGGGS FMGKFTAGVA 
AIFLLSSMTL TFISTKGSNA SSVMDGVKAP TAQEQKLPAA PELPLVPKEA KPVENTGSKP
IPVE