| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1813 |
|---|
| Symbol | |
|---|
| ID | 4480429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2243803 |
|---|
| End bp | 2245341 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639722555 |
|---|
| Product | response regulator receiver modulated metal dependent phosphohydrolase |
|---|
| Protein accession | YP_865727 |
|---|
| Protein GI | 117925110 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0479529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.434013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TTCGTAAAAT ACGTGATACC AAAGATCGCG CCAAGCCCTT GCAGAAACAG
GAAGTTTCTC GCGATAACCC GTGGCGTGTG TTGGTGGTTG ATGATGATGA AGATATCCAT
GTTTTAACCT GCTTAAATTT ACGGGATTTC TCTTTTGCTG GCCAAGCTAT TGAGATTGTC
TCCGCACGAT CTGCGGAAGA GGCCAAGCAA GTGATGACCA CGCAAGCCCC TTTCGCCGTG
GCTTTCATCG ATGTTGTGAT GGAGGAGGAG GATGCCGGCT TAAAATTGGT GGAGTGGATA
CGCGAAAGTT GGGGCGACCA ACAGATTCGA TTAATCATTC GTACCGGTCA ACCGGGCGTA
GCTCCTGAAC GTTATGTTAT TGATAATTAT GATATTGATG ATTACAAAGA TAAAACCGAG
CTGACGGCTA ACCGACTTTA CACGGCGCTA CGTACCGCTA TTAAGGCCTA TCGCGATCTG
CAAGTTATTG AGACCAATCG GTTGGGGTTA GAGCGTATTC TTGAAAGCAC GCCTAACCTC
TTTCCGCGCA ATATTGAGGT TGTTCCTGAA TTTTTCCAAG GTGTTTTAAC GCAAATTATA
AGCCTCTGTC ATCTGGGTAA AAACAGCATG GTAAGCAGTG GCGATGGTAT GATTCTCACC
CTTTCCGGTG AAAAGGTGGT GGTTCAGGCT GGTACCGGTG ATTTTGAGGA TAAACAGAGC
AGCAAGACCG CTGCTGTGGT GACGTTGTGC CAACAGGTTA TGCAATCTGA ACGCAAAGTT
GATGAGCTTG GTCACTCTGT CCAGTTAATT CCATTGACGA CGCACCATCG GAATATGGGC
TATATCTACC TGGAGAACAC CGATCAACTG ACGGACAATG ATCGCCATAT TATTCAGGTA
ATGGCCAATC AGTTTGCAGC GGTGCTGGCC AATCTTCAGC TAACGATGGA TTTGCAAGAG
GCCAACCGTC ATGCCATGCA TATGCTTGCG ATCGCAGCTG AATTTAAAGA TACAGACACA
GGCAACCATA TTAAACGCAT TGCCAACTTG GTCACACAAG TGGCCATTGA TTTAGGTGTG
CGTCAACTCG ATGCTTTGCG TATGGGGCAG GCCAGCAAGC TGCATGATAT TGGTAAAATT
GGCGTGCCAG ACCATATTTT ACGCAAACCT GAGCAGCTTA GCAGTGAAGA GTTTGAGGTT
ATTAAAGCTC ATCCAGGTAT TGGAGCAACC ATTTTGGGTG GGCAAAATTG GTTTGAAATG
GCCCATGATA TTGCTCTTTA TCACCATGAA AAGTGGAATG GTACAGGCTA TCCGCGCGGT
TTGAGTGGCG AGGAAATCCC CCTGGCTGCA CGGATCGTGG CCATTGCAGA TGTGTTCGAC
GCCCTAACCA ATATACGCCC TTATAAAACC GCATGGAGTT TAGAAGAAGC CATGGATGAG
ATTGTTCGTG GGCGAGGGGT CCATTTTGAC CCAAATATTG TGGATATTTT TGTGAGGCTT
TATAAAGAGA AAAAACTACA TGAGCTTTGT GGGCTATAA
|
|---|
| Protein sequence | MKLIRKIRDT KDRAKPLQKQ EVSRDNPWRV LVVDDDEDIH VLTCLNLRDF SFAGQAIEIV
SARSAEEAKQ VMTTQAPFAV AFIDVVMEEE DAGLKLVEWI RESWGDQQIR LIIRTGQPGV
APERYVIDNY DIDDYKDKTE LTANRLYTAL RTAIKAYRDL QVIETNRLGL ERILESTPNL
FPRNIEVVPE FFQGVLTQII SLCHLGKNSM VSSGDGMILT LSGEKVVVQA GTGDFEDKQS
SKTAAVVTLC QQVMQSERKV DELGHSVQLI PLTTHHRNMG YIYLENTDQL TDNDRHIIQV
MANQFAAVLA NLQLTMDLQE ANRHAMHMLA IAAEFKDTDT GNHIKRIANL VTQVAIDLGV
RQLDALRMGQ ASKLHDIGKI GVPDHILRKP EQLSSEEFEV IKAHPGIGAT ILGGQNWFEM
AHDIALYHHE KWNGTGYPRG LSGEEIPLAA RIVAIADVFD ALTNIRPYKT AWSLEEAMDE
IVRGRGVHFD PNIVDIFVRL YKEKKLHELC GL
|
|---|
| |