Gene Mmc1_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1807 
Symbol 
ID4483687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2237180 
End bp2237584 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content53% 
IMG OID639722549 
Producthypothetical protein 
Protein accessionYP_865721 
Protein GI117925104 
COG category[S] Function unknown 
COG ID[COG1833] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0796576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA GTAGACCATC AGAGATTACC ATAGGCGCGC TGGGGTGTAT TCGTTTTCAG 
GCAGGGCGTT ACCTCTATGT GGGATCAGCC AAGCGTGGCT GGGATGCCCG TATCGCGCGG
CATATGGCTC CCGAAAAAAA GCTGCGTTGG CATGTTGACT ATCTGACCAC CCATCCCCAA
GTGGTTTTGC AACGCGCTTG GATGAGTGAA CAGGATCAAG AGTGCGTCAC CGCCCAACAG
TTGTTGCTTT TGCCTGGGGT TGAGGTGGCT CTACCACGCA TGGGCGCTTC AGATTGCCAA
TGTGCGGCCC ATTGTATGCG AGCAACCCAT ATTCTGTCGG TACGTCATCG ACTAAAAACC
CTGCATTACC AGTTGTGGCA GCCACCTACT AAGCGCTCTT CATAA
 
Protein sequence
MQLSRPSEIT IGALGCIRFQ AGRYLYVGSA KRGWDARIAR HMAPEKKLRW HVDYLTTHPQ 
VVLQRAWMSE QDQECVTAQQ LLLLPGVEVA LPRMGASDCQ CAAHCMRATH ILSVRHRLKT
LHYQLWQPPT KRSS