| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1780 |
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| Symbol | |
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| ID | 4483660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2200889 |
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| End bp | 2201530 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722522 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_865694 |
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| Protein GI | 117925077 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.972609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00157972 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGCCT TTAATACCGT GACCGCCATT GTCGCCCCTT TGGACCGCGC CAATGTGGAT
ACCGACGCCA TCATCCCCAA GCAGTTTTTA AAATCCATCA AGCGCTCTGG CTTTGGCCCC
AATCTGTTTG ATGAGTGGCG CTATCTGGAT CAAGGGCAGC CGGGCAAATC CAATGAAGGG
CGCCCCCTGA ATAAGGATTT TGTGCTCAAT CTGCCCCGTT ATGCCGGTGC CCGTATTTTA
CTGGCACGGG ATAATTTTGG CTGCGGCTCC AGCCGTGAGC ACGCCCCTTG GGCGTTACAA
GATTTTGGCT TTCGGGTGAT TATCGCCCCC AGTTTTGCCG ATATCTTTTT TAACAACTGT
TTTAAGAACG GTATCTTACC TATTGTGCAA GAGGCTTCGG TGGTGGATAG CCTGTTTGCC
GAGGTAGCCG CACAGCCTGG CTACCAATTA ACCGTGGATC TGCCCGCTCA GCGCATCACC
ACCCCATCGG GGCGCAGCAT CGCTTTTGAG GTAGATCCCT TTCGTAAACA CTGCCTGATT
CACGGTTTGG ATGATATTGG CCTGACCTTG CAACATGTGG CAGATATTCA AGCTTATGAA
TCCAAGCACA AGGGGCAAGC CCCCTGGGCC TTTTTGGATT GA
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| Protein sequence | MEAFNTVTAI VAPLDRANVD TDAIIPKQFL KSIKRSGFGP NLFDEWRYLD QGQPGKSNEG
RPLNKDFVLN LPRYAGARIL LARDNFGCGS SREHAPWALQ DFGFRVIIAP SFADIFFNNC
FKNGILPIVQ EASVVDSLFA EVAAQPGYQL TVDLPAQRIT TPSGRSIAFE VDPFRKHCLI
HGLDDIGLTL QHVADIQAYE SKHKGQAPWA FLD
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